LOC111196372


Basic Information

Item Value
gene id LOC111196372
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019170708.1
NCBI id APWO02000306.1
chromosome length 628061
location 143901 ~ 149783 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022685590.1
atggagatgatggtaaagctgcaggGGGAAGACTTTACAGGACAGTCCTGCTCCACCGGTAGAGCTCTTATCCACCCCTCACCCCAACACCCCAACACCCCAACACCCCTCACCCCAACACCCCTCACCCCAACAACCCCTCACCCCACACCCCAACACCCCAACCACCCCTCACCCCAACACCCCTCACCCCAACACCCCAACACCCCTCACCCCAACAACCCCTCACCCCAACCACCCCAACACCCCTCACCCCAACACCCCTTCACCCCAACACCCCTCACCCCAACACCCCTCACCCCAACACCAACACCCCTCACCCCAACACCCCTTCACCCCAACACCAACACCCCTCACCCCAACACCCCAACCACCCCTCACCCCAACACCCCTCACCCCAACACCCACACCCCTCACCCCAACACCCCTACCCCAACACCCCTCACCCCAACACCTCACCCCAACACCCCAACACCCCTCACCCCAACACCCACACCCCTCACCCCACACCCCTCACCCCAACACCCCTCACCCCAACACCTCACCCCAACACCCCAACACCCCTCACCCCAACACCCAACACCCCAACACGCCTCACCCCAACACCCCAACACCCCTCACCCCAACGCCCCTCACCCCAACACCCCTCACCCCACACCCCTCACCCCAACACCCCTCACCCCAACACCCCTCACCCAACACCCCAACAACCCCTCACCCAACACCCCAACACCCCAACACCCAACACCCCTCACCCCAACACCCCCACCCAACACCCCAACACCCCTCACCCCAACGCCCCTCACCCCAACACCCCTTCACCCCAACACCCCTCACCCCAACACCCCTCACCCCAACACCCCTCACCCCAACACCCCTTCACCCCAACACCCCAACACCCACACCCCTCACCCCAACACCCACACCCAACACGCCTCAGTGACCACCGCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022685590.1 True 954 mRNA 0.64 2 143901 149783

Neighbor

gene id symbol gene type direction distance location
LOC103022950 LOC108415555 coding upstream 159540 309323 ~ 402604 (-)
LOC103026596 LOC107667128,LOC107752991,LOC101471794,LOC100697574,LOC105908578,LOC105030909 coding upstream 254767 404550 ~ 420783 (-)
LOC103036421 NA coding upstream 302334 452117 ~ 470964 (-)
LOC103036123 LOC108237137,LOC106516477,LOC107745898,LOC106517404,LOC107376678,LOC108413863,LOC107552490 coding upstream 348486 498269 ~ 518817 (-)
tbc1d24 tbc1d24 coding upstream 378620 528403 ~ 546704 (-)
G229244 NA non-coding upstream 20364 170147 ~ 265402 (-)
G229227 NA non-coding upstream 75973 225756 ~ 299349 (-)
G229253 NA non-coding upstream 90331 240114 ~ 254812 (-)
G229246 NA non-coding upstream 108462 258245 ~ 259980 (-)
G229226 NA non-coding upstream 136122 285905 ~ 366760 (-)
G229233 NA other upstream 23432 173215 ~ 223313 (-)

Expression


Co-expression Network