Gene
RNA
| Item | Value |
|---|---|
| gene id | G74982 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 9575648 ~ 9576149 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU85525 | False | 277 | TUCP | 0.50 | 1 | 9575648 | 9575924 |
| TU85526 | False | 502 | lncRNA | 0.50 | 1 | 9575648 | 9576149 |
| TU85530 | False | 325 | TUCP | 0.50 | 1 | 9575648 | 9575972 |
| TU85527 | True | 278 | lncRNA | 0.51 | 1 | 9575695 | 9575972 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_09513757_09517777 | CUEDC2 | coding | downstream | 57871 | 9513268 ~ 9517777 (-) |
| CI01000012_09465977_09473475 | DNAJB12A | coding | downstream | 102173 | 9465948 ~ 9473475 (-) |
| CI01000012_09419200_09460604 | SPOCK2 | coding | downstream | 114360 | 9419095 ~ 9461288 (-) |
| CI01000012_09400481_09401810 | EIF4EBP2 | coding | downstream | 173270 | 9398076 ~ 9402378 (-) |
| CI01000012_09379379_09394499 | PALD1B | coding | downstream | 180598 | 9379151 ~ 9395050 (-) |
| CI01000012_09589749_09615649 | PAX2A, PAX2 | coding | upstream | 12295 | 9588444 ~ 9615649 (-) |
| CI01000012_09754856_09756772 | CHST3A | coding | upstream | 178446 | 9754595 ~ 9756956 (-) |
| CI01000012_09782840_09786910 | LRIT2 | coding | upstream | 206461 | 9782610 ~ 9786910 (-) |
| CI01000012_09789066_09792437 | LRIT1A | coding | upstream | 211546 | 9787695 ~ 9792437 (-) |
| CI01000012_09830411_09851586 | OGDHL | coding | upstream | 254016 | 9830165 ~ 9851870 (-) |
| G74981 | NA | non-coding | downstream | 3213 | 9572222 ~ 9572435 (-) |
| G74976 | NA | non-coding | downstream | 20117 | 9555299 ~ 9555531 (-) |
| G74973 | NA | non-coding | downstream | 31452 | 9543959 ~ 9544196 (-) |
| G74971 | NA | non-coding | downstream | 34999 | 9540436 ~ 9540649 (-) |
| G74969 | NA | non-coding | downstream | 38042 | 9537400 ~ 9537606 (-) |
| G74986 | NA | non-coding | upstream | 8725 | 9584874 ~ 9585170 (-) |
| G74994 | NA | non-coding | upstream | 55090 | 9631239 ~ 9631450 (-) |
| G74996 | NA | non-coding | upstream | 59998 | 9636147 ~ 9636398 (-) |
| G74997 | NA | non-coding | upstream | 60756 | 9636905 ~ 9637144 (-) |
| G75001 | NA | non-coding | upstream | 63297 | 9639446 ~ 9639649 (-) |
| CI01000012_09082056_09083285 | NA | other | downstream | 492159 | 9081877 ~ 9083489 (-) |
| CI01000012_09071892_09073410 | NA | other | downstream | 502191 | 9071371 ~ 9073457 (-) |
| CI01000012_09068458_09070536 | NA | other | downstream | 504981 | 9067906 ~ 9070765 (-) |
| G74701 | NA | other | downstream | 1208005 | 8367019 ~ 8367643 (-) |
| G75608 | NA | other | upstream | 1035766 | 10611915 ~ 10620871 (-) |
| CI01000012_12047175_12052116 | NA | other | upstream | 2472895 | 12046728 ~ 12052541 (-) |
| CI01000012_12079581_12084139 | NA | other | upstream | 2502787 | 12078936 ~ 12084260 (-) |
| CI01000012_12954694_12954954 | SF3B5, BRAFLDRAFT_284483 | other | upstream | 3378297 | 12954446 ~ 12957833 (-) |
| G77287 | NA | other | upstream | 4043127 | 13619276 ~ 13633819 (-) |
