G75588


Basic Information

Item Value
gene id G75588
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 11185061 ~ 11185287 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU86212
AACAGAATTCCTGGTAAAAAACTACAAGCAAATAATGTGAACTGATTCACAGTGCTTCATGGCAGTGGGTGTTCCCTGCAGAGCTCTTTTGCCATGATTTGCTTGTCACGACTCTATATGATTGGTGGAATTTTCTGTACAGCATCATGGGTAATGTAGTTTTCACCACAAATTCCCGTTAAACATAAAACATGAAATAATGTGAACGCATGGCTTCAATAAAAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86212 True 227 lncRNA 0.38 1 11185061 11185287

Neighbor

gene id symbol gene type direction distance location
CI01000012_11091957_11093675 CCDC85A coding upstream 91287 11091957 ~ 11093774 (+)
CI01000012_11043669_11044569 NA coding upstream 140420 11043394 ~ 11044670 (+)
CI01000012_11011437_11013922 NA coding upstream 171130 11011364 ~ 11013931 (+)
CI01000012_10922409_10930704 DDX43 coding upstream 253776 10922409 ~ 10931285 (+)
CI01000012_10892631_10918617 KCNQ5 coding upstream 266444 10892631 ~ 10918617 (+)
CI01000012_11277561_11292490 VRK2 coding downstream 92274 11277561 ~ 11292636 (+)
CI01000012_11319849_11326035 NA coding downstream 133773 11319060 ~ 11326904 (+)
CI01000012_11616967_11694276 NA coding downstream 430260 11615547 ~ 11694284 (+)
CI01000012_11698150_11702986 NA coding downstream 511828 11697115 ~ 11703213 (+)
CI01000012_11859839_11869022 PAPOLG coding downstream 674462 11859749 ~ 11870657 (+)
G75583 NA non-coding upstream 10346 11174487 ~ 11174715 (+)
G75578 NA non-coding upstream 16280 11168553 ~ 11168781 (+)
G75571 NA non-coding upstream 22516 11162228 ~ 11162545 (+)
G75566 NA non-coding upstream 30003 11154771 ~ 11155058 (+)
G75563 NA non-coding upstream 32677 11152059 ~ 11152384 (+)
G76018 NA non-coding downstream 66530 11251817 ~ 11252102 (+)
G76137 NA non-coding downstream 589252 11774539 ~ 11774869 (+)
G76138 NA non-coding downstream 589698 11774985 ~ 11775184 (+)
G76143 NA non-coding downstream 600193 11785480 ~ 11785691 (+)
G75533 NA other upstream 39322 11144817 ~ 11145739 (+)
CI01000012_10223957_10235955 NA other upstream 960774 10223697 ~ 10236276 (+)
G73578 NA other upstream 2817434 8366806 ~ 8367627 (+)
CI01000012_07806089_07811902 BEND3 other upstream 3377206 7805248 ~ 7811902 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 5260756 5922385 ~ 5929186 (+)
G76385 NA other downstream 1445468 12630755 ~ 12675666 (+)
G76374 NA other downstream 1560244 12745531 ~ 12749169 (+)
CI01000012_13029637_13033226 RGS17 other downstream 1830219 13029435 ~ 13038899 (+)
G76645 NA other downstream 2466572 13651859 ~ 13652234 (+)
G76656 NA other downstream 2518200 13703487 ~ 13739731 (+)

Expression


Co-expression Network