G244612


Basic Information

Item Value
gene id G244612
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019171228.1
NCBI id APWO02000826.1
chromosome length 1889954
location 1051610 ~ 1051855 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU333923
aggcccctggggttaggggtgtgaccactgtgacccggaaggaggaagcacacagagatacacagacacggggattaaattaactcaaaacgtacctttattttcgaaaatgccctccaccacacccaaaaacaaacttaaataaacataactcggcccaatggggctctagagtctatAAATCACTTAGTGGTCGTTTAAAGGTCCGTGCGGCCTCAGCTCACTCCTCCCAAGTCCAAGTCTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU333923 True 246 lncRNA 0.48 1 1051610 1051855

Neighbor

gene id symbol gene type direction distance location
LOC111197342 NA coding downstream 172093 874057 ~ 879517 (-)
LOC111197343 LOC108412955 coding downstream 178988 857669 ~ 872622 (-)
thsd7b LOC108414794 coding downstream 717433 126091 ~ 334177 (-)
LOC103033680 NA coding downstream 944681 100662 ~ 106929 (-)
LOC103035897 NA coding downstream 951745 88419 ~ 99865 (-)
LOC103040456 LOC108443386 coding upstream 320478 1372333 ~ 1390526 (-)
LOC103022914 fev,LOC108411904,LOC103392488 coding upstream 595036 1646891 ~ 1653574 (-)
LOC111197335 cryba2,LOC105907595,LOC107749902,LOC107748546 coding upstream 607183 1659038 ~ 1665729 (-)
itgav NA coding upstream 648850 1700705 ~ 1752812 (-)
G244604 NA non-coding downstream 47430 1003881 ~ 1004180 (-)
G244598 NA non-coding downstream 76388 936485 ~ 975222 (-)
G244581 dars,LOC107663896,LOC107676220,LOC107706104,LOC107749888 non-coding downstream 197086 850279 ~ 854524 (-)
G244578 dars,LOC107676220,LOC107749888 non-coding downstream 204719 790959 ~ 846891 (-)
G244573 cxcr4,LOC107706106,LOC107676218 non-coding downstream 253504 771857 ~ 798106 (-)
G244613 NA non-coding upstream 733 1052588 ~ 1052787 (-)
G244618 NA non-coding upstream 39227 1091082 ~ 1091668 (-)
G244620 NA non-coding upstream 72512 1124367 ~ 1124714 (-)
G244622 NA non-coding upstream 86758 1138613 ~ 1138836 (-)
G244665 NA non-coding upstream 126790 1178645 ~ 1222218 (-)
LOC103033996 hnmt,LOC108413065 other downstream 937045 108507 ~ 114565 (-)
LOC103035287 NA other downstream 973315 62253 ~ 78295 (-)
umps NA other upstream 580224 1632079 ~ 1686088 (-)
G244785 NA other upstream 666967 1718822 ~ 1723437 (-)
zc3h15 zc3h15,LOC107752875,LOC107663835,LOC107562108,LOC107749874,LOC107672221 other upstream 707186 1759041 ~ 1771385 (-)
LOC103023859 LOC108413098,LOC105902664 other upstream 721817 1773672 ~ 1794855 (-)
LOC111197344 NA other upstream 750880 1802735 ~ 1830865 (-)

Expression


Co-expression Network