CI01000013_01220794_01229752 (GNRHR4)


Basic Information

Item Value
gene id CI01000013_01220794_01229752
gene name GNRHR4
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 1220794 ~ 1230958 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_01220794_01229752.mRNA
ATGCATCACAGCAAGATCAGCAACACGGACTATCAAATAAAGGAGCTTTTCCAGGTACTATCAGCACTGTCTCCTTCCCTGGAATCATCATGGATCGTCTGTAAACCTCATTGTGCAGCAGGTAGTGGAACGAATGCAGCAAACACACGCTTTTGCTCTTCAGTGATGAATGACAGCTCTCCAACATCTGAGAACATCATGTTTCACCAGCTGACTGCAGATGCTCTGAACGGCAGTTGTGACTACACCTTGCCCACGTGTAACAATAGCACAGGTGAAGCGGCATTGCAGCTGCCCACCTTTTCCATGGCAGCGAAAGTGAGGGTGATAATTACCTTTACTCTTTGCGCAGTGTCAGCTGTGTGCAACCTCGCCGTGTTGTGGGCTGCCAGCACCAACAACAAGCGCAAATCCCATGTACGTATTTTAATCATGAACCTCACCGTTGCCGACCTGCTGGTGACTTTCATCGTGATGCCAGTGGATGCGGCTTGGAACATTACGGTTCAGTGGTTGGCGGGGGATCTGGCTTGCAGATTGTTAATGTTTCTGAAGCTCGTGGCTATGTACTCCTGTGCGTTCGTGACTGTGGTCATAAGCCTGGACAGGCAGTCGGCCATTCTCAACCCTCTGGCCATCAATAAGGCTAAGAAGAAGAACAAAATAATGCTAAGCGTGGCCTGGGCGATGAGTGTTGTGCTCTCTGTCCCTCAGATGTTTCTCTTTCACAATGTGACCATCACGGTGCCAGCCAATTTCACTCAGTGCACCACCCGAGGGAGCTTCGTCCAACACTGGCAGGAGACCATTTACAATATGTTCACTTTCATTTGCCTCTTCTTGATACCTCTGGCCATCATGATCTGCTGCTACACGAGGATCTTGGTGGAGATCTCCCGAAGGATGACCAAAGGAAACATATCTTCAAAGGAAGTCCACTTAAGGCGTTCCAACAGCAACATCCCAAAGGCCCGTATGAGGACTTTGAAAATGAGCATAGTCATTGTGACGTCTTTCATAGTTTGTTGGACGCCGTACTACCTGCTGGGTCTCTGGTACTGGTTCCTTCCTGAGGATTTAGAAGAGACAGTTTCTCACTCACTGACTCACATACTGTTTATTTTTGGACTTTTTAATGCAATTCTGGATCCCATCACTTATGGCCTCTTCACCATCCATTTCCGCAAAGGACTGAAGCGTTACTGTCGCAACGCGGCCGTACTCACAGAGTCAGAAAATAACTCAATCCTGACGGGCTCATTGAAATGCTCACCATCTCCGTTTCGCATGAAAAGAGTGACCCAGACGACTCCAGGAGCTGATCCAGAAAAGAATATGGTGAGTGGTGAAGATAAGAAGCCAGAGAGTAAAAACAAGGAATAGAGGCAACTCTATCAGTCCATCCTTGAAAGTGTCATTTGATTAGAGATACAGATACAGATATGACAAGGCAGGCCTTGTACTGGCTGTCTAGCTGCTCACAAGAACAATGAGACAACAGCACATACCTGCCTGTTCTCCTCAACAGCATGAGACAGATTCAAATTGTCGCATCTTTTGATTCATTCACTGATGAGCTGCGTAAATTACTCCGTTACATTTAATACCCATCTATTTTCCTGATTCAGGTGATTAAGTTTTGTAATCATTTGTGCTTTACTAAATATGCCAATCACATTTTTTTCTTCTGCAGATTAATTAGACCGTTGCTTCTTGTGGCTTTTGTTGAAAATGTCATTTACATCAAGGGTTTTCTTTCTTTTTTTGCATCTCATACAAATCTAAGTAGTTCAGCATCTCCACCCGCTATCACAAAGGGCATTGCTCTTGAACTGCTTGTTTGTAAGGAAATTGCTTTCATCTACAAACAAATAAGATGTGTGGCGTTTTGAGATATTACAAATGCAAATTAATGTACATTGATTCTTGAATAATTTTCTGGTGTTAATTGGAAACGTTCAATCGTACCTTTTCAGGAATCTTAACCCAGCCTCTTTAGATGGTATCGTTTAATGTGTAGACTTTTTATTGAATAGATTCAGAATCACTAACCAGCCTCAAGAGTTCCTGCATTTGAAGTCAATACTATTACAGGGCAGCCTGATCTTATAAGAATCCATATTTATTCATCTGAAGTATTCAGCAGGGCCCTGAATTAGAGGAAGGGGTCCCCCTCATTCTGTTCGCGATTGCCCTTTGAGGAAGGGGGGCTGCCCTTGGTCTGTTCGAAACGGGGCCCCCTAAAGCACGGGGCCAGTTGCACCCCCCTAAGGACGGCTCTTTATGTGGCGTTTACGCATACATTTTTGTATGTTTGCATACAATATAGACTGTAATGTGCAATATGGATGTATTGACAGCATCTACAATCTAAAAGTATTTACATATGCACAGCATTTTAAATGTAAAAATCCTTCTGAATTCTTTATGTATAGTTTTATAAATATGGAGCCAGATCAGCCTCAAAAATAATACATTTACAAAACAAAATTGATAAATGTACAGCACAATTCACGATTCGTAAAAATTTGTACACAAGTAAAAGCATAAATATTTCCCCAAATGCTCACACAAATGCATCTTACCTAA

Function

symbol description
gnrhr4 Enables gonadotropin-releasing hormone receptor activity. Acts upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in several structures, including gonad; heart; intestine; male organism; and nervous system. Human ortholog(s) of this gene implicated in hypogonadotropic hypogonadism 7 with or without anosmia. Orthologous to several human genes including GNRHR2 (gonadotropin releasing hormone receptor 2 (pseudogene)).

NR:

description
pituitary gonadotropin releasing hormone receptor

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04280 GNRHR; gonadotropin-releasing hormone receptor

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_01220794_01229752.mRNA True 2589 mRNA 0.43 4 1220794 1230958

Neighbor

gene id symbol gene type direction distance location
CI01000013_01115756_01164524 NA coding upstream 56270 1115756 ~ 1166617 (+)
CI01000013_01036536_01049545 NA coding upstream 170912 1036536 ~ 1049882 (+)
CI01000013_01007844_01029438 SEMA4B, SEMA4BA coding upstream 191335 1007844 ~ 1029459 (+)
CI01000013_00870861_00871425 IDH2 coding upstream 349272 870861 ~ 871522 (+)
CI01000013_00862608_00869073 IDH2, IDHP, IDH2.S coding upstream 351721 862418 ~ 869073 (+)
CI01000013_01275415_01295230 PLIN1 coding downstream 44164 1275122 ~ 1295324 (+)
CI01000013_01335438_01381270 SLCO3A1 coding downstream 104480 1335438 ~ 1381270 (+)
CI01000013_01405290_01429838 NA coding downstream 174332 1405290 ~ 1430313 (+)
CI01000013_01443540_01469011 CHD2 coding downstream 212582 1443540 ~ 1469076 (+)
CI01000013_01629280_01635701 NA coding downstream 398270 1629228 ~ 1635772 (+)
G77829 NA non-coding upstream 33603 1186909 ~ 1187191 (+)
G77826 NA non-coding upstream 39366 1181202 ~ 1181428 (+)
G77800 NA non-coding upstream 146965 1073502 ~ 1073829 (+)
G77765 NA non-coding upstream 283337 937249 ~ 937457 (+)
G77894 NA non-coding downstream 86293 1317251 ~ 1317663 (+)
G77895 NA non-coding downstream 86763 1317721 ~ 1317963 (+)
G77875 NA non-coding downstream 239862 1470820 ~ 1471360 (+)
G77918 NA non-coding downstream 253516 1484474 ~ 1484721 (+)
G77695 NA other upstream 267825 946521 ~ 952969 (+)
G77533 NA other upstream 511245 708833 ~ 709549 (+)
G79309 NA other downstream 1235807 2466765 ~ 2467171 (+)
G80062 NA other downstream 2353050 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 2833975 4050837 ~ 4065829 (+)
G80845 NA other downstream 3604120 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 4825340 6049864 ~ 6060269 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_013447 gnrhr4 coding NC_007129.7 CM002902.2 25391171 ~ 25402715 (-)