trnae-cuc_42


Basic Information

Item Value
gene id trnae-cuc_42
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019171900.1
NCBI id APWO02001498.1
chromosome length 225111
location 193345 ~ 193416 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnae-cuc_42
TCCCTGGTGGTCTAGTGGCTAGGATTCGGCGCTCTCACCGCCGCggcccgggttcgattcccggtcaGGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnae-cuc_42 True 72 tRNA 0.67 1 193345 193416

Neighbor

gene id symbol gene type direction distance location
trnae-cuc_41 NA coding upstream 586 192688 ~ 192759 (+)
trnae-cuc_40 NA coding upstream 1244 192030 ~ 192101 (+)
trnae-cuc_39 NA coding upstream 1902 191372 ~ 191443 (+)
trnae-cuc_38 NA coding upstream 2560 190714 ~ 190785 (+)
trnae-cuc_37 NA coding upstream 3217 190057 ~ 190128 (+)
trnae-cuc_43 NA coding downstream 586 194002 ~ 194073 (+)
trnae-cuc_44 NA coding downstream 1243 194659 ~ 194730 (+)
trnae-cuc_45 NA coding downstream 1900 195316 ~ 195387 (+)
trnae-cuc_46 NA coding downstream 2556 195972 ~ 196043 (+)
trnae-cuc_47 NA coding downstream 3213 196629 ~ 196700 (+)
G265371 NA non-coding upstream 34267 157023 ~ 159078 (+)
G265378 NA non-coding upstream 92408 100704 ~ 100937 (+)
G265376 NA non-coding upstream 100386 92676 ~ 92959 (+)
G265373 NA non-coding upstream 106820 86322 ~ 86525 (+)
LOC103027170 rab5aa,LOC108411561,LOC105904716,LOC101476881,LOC103376428 other upstream 36414 132397 ~ 156931 (+)

Expression


Co-expression Network