trnae-cuc_49


Basic Information

Item Value
gene id trnae-cuc_49
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019171900.1
NCBI id APWO02001498.1
chromosome length 225111
location 197941 ~ 198012 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnae-cuc_49
TCCCTGGTGGTCTAGTGGCTAGGATTCGGCGCTCTCACCGCCGCggcccgggttcgattcccggtcaGGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnae-cuc_49 True 72 tRNA 0.67 1 197941 198012

Neighbor

gene id symbol gene type direction distance location
trnae-cuc_48 NA coding upstream 585 197285 ~ 197356 (+)
trnae-cuc_47 NA coding upstream 1241 196629 ~ 196700 (+)
trnae-cuc_46 NA coding upstream 1898 195972 ~ 196043 (+)
trnae-cuc_45 NA coding upstream 2554 195316 ~ 195387 (+)
trnae-cuc_44 NA coding upstream 3211 194659 ~ 194730 (+)
trnae-cuc_50 NA coding downstream 586 198598 ~ 198669 (+)
trnae-cuc_51 NA coding downstream 1243 199255 ~ 199326 (+)
trnae-cuc_52 NA coding downstream 1900 199912 ~ 199983 (+)
trnae-cuc_53 NA coding downstream 2557 200569 ~ 200640 (+)
trnae-cuc_54 NA coding downstream 3214 201226 ~ 201296 (+)
G265371 NA non-coding upstream 38863 157023 ~ 159078 (+)
G265378 NA non-coding upstream 97004 100704 ~ 100937 (+)
G265376 NA non-coding upstream 104982 92676 ~ 92959 (+)
G265373 NA non-coding upstream 111416 86322 ~ 86525 (+)
LOC103027170 rab5aa,LOC108411561,LOC105904716,LOC101476881,LOC103376428 other upstream 41010 132397 ~ 156931 (+)

Expression


Co-expression Network