trnae-cuc_57


Basic Information

Item Value
gene id trnae-cuc_57
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019171900.1
NCBI id APWO02001498.1
chromosome length 225111
location 203195 ~ 203265 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnae-cuc_57
TCCCTGGTGGTCTAGTGGCTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCGGTCAGGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnae-cuc_57 True 71 tRNA 0.66 1 203195 203265

Neighbor

gene id symbol gene type direction distance location
trnae-cuc_56 NA coding upstream 587 202538 ~ 202608 (+)
trnae-cuc_55 NA coding upstream 1243 201882 ~ 201952 (+)
trnae-cuc_54 NA coding upstream 1899 201226 ~ 201296 (+)
trnae-cuc_53 NA coding upstream 2555 200569 ~ 200640 (+)
trnae-cuc_52 NA coding upstream 3212 199912 ~ 199983 (+)
trnae-cuc_58 NA coding downstream 585 203850 ~ 203921 (+)
trnae-cuc_59 NA coding downstream 1242 204507 ~ 204578 (+)
trnae-cuc_60 NA coding downstream 1898 205163 ~ 205234 (+)
trnae-cuc_61 NA coding downstream 2555 205820 ~ 205891 (+)
trnae-cuc_62 NA coding downstream 3212 206477 ~ 206548 (+)
G265371 NA non-coding upstream 44117 157023 ~ 159078 (+)
G265378 NA non-coding upstream 102258 100704 ~ 100937 (+)
G265376 NA non-coding upstream 110236 92676 ~ 92959 (+)
G265373 NA non-coding upstream 116670 86322 ~ 86525 (+)
LOC103027170 rab5aa,LOC108411561,LOC105904716,LOC101476881,LOC103376428 other upstream 46264 132397 ~ 156931 (+)

Expression


Co-expression Network