XLOC_007713 (zgc:162144)


Basic Information

Item Value
gene id XLOC_007713
gene name zgc:162144
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 8619126 ~ 8625845 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00015114
AGGAGAGCGTCTCATCTGGAGTGCTCAGACTGGAAAACAAAACctcaatttacactttttttaatcaGCATTTTTGTGCTATATTTCTCTCAATCCAATTTGGATTTGTCGGACGTTAAAACAGGAGTATTCTGTCAGCTTCTGAAAACTCAACATTATCTGAAAGATGTTCCCATGGTCAGTGGTGTTTTCTCTGGAGCCGAAGGTTCCCGGTCAGCGCACTCCAGAAGAGCTGGTGACCAACACTCTGATGCTGGAGCTGGGGGCGATGGTGAAGCGGACCGAGCGCATCCAGCTGGAGAAAGCAGCTGAGAATCGCAGACGCCGCAACTCTTCCTCCGCAGACTACAGCTGGCTGGCGGGACCACAGCCGCGCGCCCCCTACGAGCTCCTGCCCGGAGATGTCCTGGAACTGCAGGAGCTCTGCGCTCAGATCCCTCCACAGCAGTGCGGACCCGTCATCGTCAGGTTCCGGAAGCTGGTGTCAGAGATTGAGCCAGAGGTGCACGAGGTCCCCAAACTGTTCCGGAGCGTGCTGAGAAACTGCCTGGAAGAGCTTCAGGGAGACGCGGAGCTCCAGGACCGAGTAAACCGCTGGGAAAAACAGCGCAGCAAGAGCCTCTCCTTCGTCACCTTCAAATCCAAGTTTCGCAACTTGAACCGCGGCAAGGGAAGCTTCGGCGGATCACGAAACAACCTGCAGGAGGAAAACACATGGTCTGATGAAGAGGAAGAGGAAGCGGCCGAACAGGTGGCAAAAGCCATCCGCACTCGGAAAGGACGGAGCCTTAGCATGCCGGAGATCACCCCGCTGGAGCAGGCGGCGCAGAGCTGAACACCTCAAACACAAAGGAGAGAAGATACAGGAGAAATGTACAACGGCaatggagagagaaaagagaagagGAAACATCTAAAAGACTCAAGATTGTGCTTTCAGACTGTATGACTAAATTATTCATACCAAAGAACACAGTGTATTGGCATATGGAAGATGCCTACAGCCTAGTCCTTTTTAAAACTACATAATGTGCGTCAATAATTTGAATGTTTAGATATGAACATTTGgcataaatgtaaatactttttGTAAGAATGAAGCGCACACAACCAAGAGCATGTTCAGCTCATGTTTCACCCCCATATCAAAAGAATATACAATTTGTAAATACTTGgaatatacatatattcataagCATAGGATTATGTTGCACATTTAAATTAAGGGAAACAATTcagtattgttttaaaaaacGCACAAGTGTTAATTatactgcaaataaaaaaaaatacatttta

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-7630 No description available

Ensembl:

ensembl_id ENSDARG00000037603

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00015114 True 1299 mRNA 0.47 3 8619126 8625845

Neighbor

gene id symbol gene type direction distance location
XLOC_007712 NA coding downstream 162447 8450841 ~ 8456679 (-)
XLOC_007711 CR407701.1 coding downstream 235203 8383549 ~ 8383923 (-)
XLOC_007709 NA coding downstream 335927 8245582 ~ 8283199 (-)
XLOC_007710 purab coding downstream 347440 8261417 ~ 8271686 (-)
XLOC_007708 zgc:92242 coding downstream 538710 8043441 ~ 8080416 (-)
XLOC_007714 pimr56 coding upstream 96307 8722152 ~ 8724290 (-)
XLOC_007715 tgfb5 coding upstream 144307 8770152 ~ 8795081 (-)
XLOC_007716 trmt112 coding upstream 180382 8806227 ~ 8814590 (-)
XLOC_007717 si:dkeyp-115e12.7 coding upstream 190023 8815868 ~ 8816933 (-)
XLOC_007718 ATG2A coding upstream 193219 8819064 ~ 8890437 (-)
XLOC_007641 CU855896.1 misc downstream 6211286 2407736 ~ 2407840 (-)
XLOC_007640 CU855896.2 misc downstream 6211695 2407328 ~ 2407431 (-)
XLOC_007639 CU855896.3 misc downstream 6212054 2406945 ~ 2407072 (-)
XLOC_007707 NA non-coding downstream 651647 7963276 ~ 7967479 (-)
XLOC_007704 si:ch211-39i2.2 non-coding downstream 874973 7724876 ~ 7744153 (-)
XLOC_007720 NA non-coding upstream 398480 9024325 ~ 9028962 (-)
XLOC_007730 NA non-coding upstream 943065 9568910 ~ 9570304 (-)
XLOC_007731 NA non-coding upstream 945898 9571743 ~ 9581138 (-)
XLOC_007737 NA non-coding upstream 1842392 10468237 ~ 10469588 (-)
XLOC_007739 NA non-coding upstream 1898898 10524743 ~ 10525506 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000110_00194383_00196659 NA coding CI01000110 null 194020 ~ 196659 (-)