XLOC_007714 (pimr56)


Basic Information

Item Value
gene id XLOC_007714
gene name pimr56
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 8722152 ~ 8724290 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00015115
ATATATAAACGCTGAAACCCACCGCTATCTGTTGGAGAGACGAGGAGAGATTTGAGAGAGAATTGAGACATTTCTGTGCTGAAACTGCGATTCTTCAAGGAGACCAGAGGATTTCTGACAGAAGACTTGTATTTTATAAGGAGATCGACggatattttctttgaaaagtgttttcattttttgaaaGAGCTTAAATTGTTGCTTTCGACaccttttgtcattattttatcgtgtttaatcttgtttttagtttcattttatttcagtttctaatttaaattgatattttatttctttatttgctttTTTCAGCGTTGGTGGAGTTTGGAGGAGTTTGTCAATGGATCACAGCATCATGGGTGAAAGACGAGGCCGCTCCAGATCCAGGAGTGCTGCTTTCACCCAGGCAGCTGTTCAGGACGTCTGGACAcatgatggtgatggtgaaacCCGGACCGTGAGCCGAGAGCTTCCAGGATTTGTCGCTCCTCTGTCTTCCCTGTTGGCCGAGTCTTTGTCCGCAGATCAGGGTAACAGGAAGAGGAAGTGGCAGAGCGGCAGCCAGCAAACGCCAGAAGAGGAACGTCCGTCCACCTCATCTAGAAGAGcagccaaacgctctcgcagagACGAGTATGTGAAGGGCCCACTGCTGGgacgaggtggattcggctctgtgtttgctgggatccGCAGGTCagatggactgccaGTGGCCATCAAATATGTGTCTAAAGACCGGACGCAGAGGAGACTGAGAGTCgatggtcagggtcggctgcctCTGGAGGTGGCACTGATGACCCGCGTCACTTCAGCTCCTGCCTGCCCTTatgtcctgcagctgctggactggtttgactGTCCCAGACGCTACGTCCTGATCCTGGAGCGGCCGTCTCCTTGCCAGgatctccagagcttctgtgaggagaacggctgtctggacGAGCGTCTGGCCAAGAgagtgctggtgcagctgatcgcggcgctgaaacactgcgagagccgccgcgtcctgcaccgggacgtcaagCCGGAGAAtctgctgatctccacagagtcccaggacatcaagctgctggactttggctgtggagatctgctaaagcgctcggcctacaaatacttcTCAGGCACTCTTGAATATGCTCCACCTGAGTGGTTCCACAGACAGCGCTATCATGCGGCTCCAGctacagtctggtcagtaggagtgaccCTCTTCAACATCCTGTGCGACCGTTTCCCTTTCAGAGGTGCACGGAGGGTCACGTCCAAAAGCAGACTGCACTTTCCCAGACAGCTGTCCACAGagtgccgtcagctgattcgctggtgtctcagtcCAGCGGCAGCTGATCGGCCCAGTTTGGATGATattgagagccatccctggttACAGTGA

Function

symbol description
pimr56 Predicted to enable ATP binding activity; protein serine kinase activity; and protein threonine kinase activity. Predicted to act upstream of or within negative regulation of apoptotic process and protein phosphorylation.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000071880

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00015115 True 1408 mRNA 0.52 7 8722152 8724290

Neighbor

gene id symbol gene type direction distance location
XLOC_007713 zgc:162144 coding downstream 96307 8619126 ~ 8625845 (-)
XLOC_007712 NA coding downstream 265473 8450841 ~ 8456679 (-)
XLOC_007711 CR407701.1 coding downstream 338229 8383549 ~ 8383923 (-)
XLOC_007709 NA coding downstream 438953 8245582 ~ 8283199 (-)
XLOC_007710 purab coding downstream 450466 8261417 ~ 8271686 (-)
XLOC_007715 tgfb5 coding upstream 45862 8770152 ~ 8795081 (-)
XLOC_007716 trmt112 coding upstream 81937 8806227 ~ 8814590 (-)
XLOC_007717 si:dkeyp-115e12.7 coding upstream 91578 8815868 ~ 8816933 (-)
XLOC_007718 ATG2A coding upstream 94774 8819064 ~ 8890437 (-)
XLOC_007719 zgc:153681 coding upstream 169239 8893529 ~ 8940499 (-)
XLOC_007641 CU855896.1 misc downstream 6314312 2407736 ~ 2407840 (-)
XLOC_007640 CU855896.2 misc downstream 6314721 2407328 ~ 2407431 (-)
XLOC_007639 CU855896.3 misc downstream 6315080 2406945 ~ 2407072 (-)
XLOC_007707 NA non-coding downstream 754673 7963276 ~ 7967479 (-)
XLOC_007704 si:ch211-39i2.2 non-coding downstream 977999 7724876 ~ 7744153 (-)
XLOC_007720 NA non-coding upstream 300035 9024325 ~ 9028962 (-)
XLOC_007730 NA non-coding upstream 844620 9568910 ~ 9570304 (-)
XLOC_007731 NA non-coding upstream 847453 9571743 ~ 9581138 (-)
XLOC_007737 NA non-coding upstream 1743947 10468237 ~ 10469588 (-)
XLOC_007739 NA non-coding upstream 1800453 10524743 ~ 10525506 (-)

Expression


Co-expression Network