LOC111190877 (manbal,LOC107666036,LOC107744407)


Basic Information

Item Value
gene id LOC111190877
gene name manbal,LOC107666036,LOC107744407
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172788.1
NCBI id APWO02002386.1
chromosome length 185308
location 98748 ~ 102589 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU399613
atgATAgtttaagacagtctctttcaaacgatggcagtagtatgtgccaatcttgagttattgaattttaagcattatttaatataaataaaaattcataaaaaatcaacgataacgtgtacgttgccgaaagtcgcacacatgataggttaagacagtctctttcaaatgATGGCAGATGGCAGATGATGGCTAAACTCTGTATTTATCCATATTAAACTGATACAGGAGACTCAGGGCTGTGGATAACTGCTTCAGATAAACATCATGTCAGGAGACCTGGACCTCTCCCCACCCGAGGTTCCTGAGCCCACCTTCTTTGAGAGTGTCCTGCGTTATGGCCTCTTTCTTGGAGCTATTTTCCAGCTTATCTGCATTTTAGCCATTATTATCCCCACATCCAAGAGCCATGAGCAGGAAGAGACTGCAGAGCCAGTCAACACCAAAGCTTCTGAACAGAGCAAAAAGCCAAAGGCCCCGATCCAGCAGATACGACAGAAACCAAAGAAGGAGAGCAAGAAGAAGAGATAAGACTGTGGAGTTTTGGTCTGAGTGTGCCAGCCAGTGTGGAATTGAGTGTTTCTGGTAAAACTGTGTGAACTTCATCATGCACTATCAAACCATGGACTGTCGAACAGCACTGCAACATTTCATATTAGAATGCGTATCTGCCCGTGTCACCattacactacagtacactCTTAAACATGAAGGTGCTTCAGATGGTTCTTTGAGCCATGCAATAGAATAtaaaaagaatttaaagaacCAAATTTGTAATAAGGACgagtgtcttattttttttttttaaaaccttaaaaaggtTATTTAATCACTTGAAATACAGATTCTTTAACCGGGTAAACATCTCTTTTACGAttgataatgatttttttaatgttttttctgtggCATCCCCCAAGGAACCGTTTGAAGCACCTTTATCTTTAAGAGTGCAGAATGTTTTCTAACATTTTAGTTCATGTATTAACTAATTTCATTGACTACATCCATAAAGTACATcctttaaatttcatttttctAATTGTATTATCGTTATAATTATGTGTATTGGGCCACTTAATAAA
>XM_022664578.1
ATATTAAACTGATACAGGAGACTCAGGGCTGTGGATAACTGCTTCAGATAAACATCATGTCAGGAGACCTGGACCTCTCCCCACCCGAGGTTCCTGAGCCCACCTTCTTTGAGAGTGTCCTGCGTTATGGCCTCTTTCTTGGAGCTATTTTCCAGCTTATCTGCATTTTAGCCATTATTATCCCCACATCCAAGAGCCATGAGCAGGAAGAGACTGCAGAGCCAGTCAACACCAAAGCTTCTGAACAGAGCAAAAAGCCAAAGGCCCCGATCCAGCAGATACGACAGAAACCAAAGAAGGAGAGCAAGAAGAAGAGATAAGACTGTGGAGTTTTGGTCTGAGTGTGCCAGCCAGTGTGGAATTGAGTGTTTCTGGTAAAACTGTGTGAACTTCATCATGCACTATCAAACCATGGACTGTCGAACAGCACTGCAACATTTCATATTAGAATGCGTATCTGCCCGTGTCACCattacactacagtacactCTTAAACATGAAGGTGCTTCAGATGGTTCTTTGAGCCATGCAATAGAATAtaaaaagaatttaaagaacCAAATTTGTAATAAGGACgagtgtcttattttttttttttaaaaccttaaaaaggtTATTTAATCACTTGAAATACAGATTCTTTAACCGGGTAAACATCTCTTTTACGAttgataatgatttttttaatgttttttctgtggCATCCCCCAAGGAACCGTTTGAAGCACCTTTATCTTTAAGAGTGCAGAATGTTTTCTAACATTTTAGTTCATGTATTAACTAATTTCATTGACTACATCCATAAAGTACATcctttaaatttcatttttctAATTGTATTATCGTTATAATTATGTGTATTGGGCCACTTAATAAATCATgtatgttcctttttttttaatgtatacctgtattgttttaaataataaactgtTTGTGGGCTCGTTCCATTCTGCCCACCCAA

Function

symbol description
manbal Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human MANBAL (mannosidase beta like).

NR:

description
PREDICTED: protein MANBAL

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU399613 True 1088 TUCP 0.38 2 98835 102589
XM_022664578.1 False 964 mRNA 0.38 1 98748 99711

Neighbor

gene id symbol gene type direction distance location
LOC111190876 NA coding downstream 20157 3201 ~ 78591 (-)
LOC103033366 NA coding upstream 21820 124409 ~ 128777 (-)
LOC103033029 NA coding upstream 27411 130000 ~ 133196 (-)
LOC103034006 LOC103034006 coding upstream 33614 136203 ~ 140590 (-)
LOC103033687 LOC107579688 coding upstream 39726 142315 ~ 154107 (-)
trnaa-ugc_29 NA coding upstream 61333 163922 ~ 163993 (-)

Expression


Co-expression Network