LOC103033029


Basic Information

Item Value
gene id LOC103033029
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172788.1
NCBI id APWO02002386.1
chromosome length 185308
location 130000 ~ 133196 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022664580.1
GCTGTTGCATCACTCTGGAATAGCCAGAAGGAGCTGTGTGTATAAATCTGTGGTGCCGGGTTTCTGTATGTAGGTAATCAGGAGTTTCTGAAGAGCTCTGTCCAACATGGCTGCCCGAATCATCTCCACTCTGGCTTTTCTCAGCCTTCTGACTTTTATTCAGGCTGCTGACCCAAACTGTGAGGATCTCACAAAGCCGCTGGTGCTGGAGGACGACTACAGTTCAatCATGGGGAAGTGGATCTTTACAGAAGGAATCGCTAATCATGAGTTGttcaaaaacatgttaaaaatagTTAACAGCTCCTGGTTGGAGTTTGCCCCCAGTTCCCTGAAAGATACAATTATTTTCAAACAAGGGAACAAGCGATATGGAATATGTTTTTTGGAGAACATCAACGCAACTGTAAAAAACAGCACCTTTTTTGCTTCTGATAAACACAGTGCATCAGAGGGCACTTTCCTGCCATCTTGTCCTGAATGCCTCACTATAAGCTTCACCCATCAGGCGAGAAATGAGTCCATaaactccctctttctcttaaCAAAAAGTCCCAAAGTGTCCGAATCTGAGAAGGATCTGTACTGGAAACAAGCTGTATGTCTCGGATTTAAAAAAGAACCTCAGTTCTCCTATGATGGAGTAACAGAACTCTGTAAAGATGATCAGATCAGTTCACCTACAGAACAGACTAAACCTGAGGACAAAAAGGAGGACTGAAAGTAAAGCCGATTTTCCCAGTGATTCATTTTGTACTGGTTAATATGGTGTATTCAGCTCTGTGGAGTTAGAGTGTTCTTTGACCTAATGTAATGGAAGACCTGCAGCATAATAAACATTGAATACAGATCAGTTGGGTTTAATGA

Function

GO:

id name namespace
GO:0019222 regulation of metabolic process biological_process
GO:0050878 regulation of body fluid levels biological_process
GO:0080090 regulation of primary metabolic process biological_process
GO:0051171 regulation of nitrogen compound metabolic process biological_process
GO:0019538 protein metabolic process biological_process
GO:0030162 regulation of proteolysis biological_process
GO:0001775 cell activation biological_process
GO:0030168 platelet activation biological_process
GO:1901564 organonitrogen compound metabolic process biological_process
GO:0051246 regulation of protein metabolic process biological_process
GO:0007596 blood coagulation biological_process
GO:0007599 hemostasis biological_process
GO:0006508 proteolysis biological_process
GO:0060255 regulation of macromolecule metabolic process biological_process
GO:0050817 coagulation biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection
ko05322 Systemic lupus erythematosus
ko05020 Prion disease

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022664580.1 True 867 mRNA 0.42 6 130000 133196

Neighbor

gene id symbol gene type direction distance location
LOC103033366 NA coding downstream 1223 124409 ~ 128777 (-)
LOC111190876 NA coding downstream 51409 3201 ~ 78591 (-)
LOC103034006 LOC103034006 coding upstream 3007 136203 ~ 140590 (-)
LOC103033687 LOC107579688 coding upstream 9119 142315 ~ 154107 (-)
trnaa-ugc_29 NA coding upstream 30726 163922 ~ 163993 (-)
LOC111190877 manbal,LOC107666036,LOC107744407 other downstream 27411 98748 ~ 102589 (-)

Expression


Co-expression Network