G82557


Basic Information

Item Value
gene id G82557
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 8982223 ~ 8982501 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU93938
AAAAAAGAGACAAACAGAAACACAAGAGATACAGCTGACTTCAGCCACAGCCTTAGATGAAATCAACTGAAGATAAAAGACATTAAATCTCTCCAGATCTCAGCAGAGGAGGATTAAACAACTCCACAAACAGCATTACAACTTCCTATTTTACGAACCAGATTGACTTTATTTCTGTCATTCATCTACAGAAGTTCTTATTGAGAATTAACAGAAGTTTAATGTTTGTTTGGTGCTTCCATTAGTTGGACTCAACTCTTATAATATGTTTGTTTTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU93938 True 279 lncRNA 0.34 1 8982223 8982501

Neighbor

gene id symbol gene type direction distance location
CI01000013_08943859_08944315 NA coding upstream 37598 8942838 ~ 8944625 (+)
CI01000013_08925040_08937556 CRACR2A coding upstream 43300 8924561 ~ 8938923 (+)
CI01000013_08652173_08660558 NA coding upstream 321152 8652173 ~ 8661156 (+)
CI01000013_08530191_08551478 NUP205 coding upstream 430602 8529349 ~ 8551621 (+)
CI01000013_08519555_08527531 FAM107B coding upstream 454512 8519110 ~ 8527711 (+)
CI01000013_09075883_09113011 NA coding downstream 93324 9075825 ~ 9113283 (+)
CI01000013_09178561_09180465 NA coding downstream 194606 9177107 ~ 9195268 (+)
CI01000013_09243644_09260619 TSPAN9A, TSPAN9B, TSPAN9, TSN9 coding downstream 261143 9243644 ~ 9260619 (+)
CI01000013_09279917_09290301 TSPAN33B coding downstream 297416 9279917 ~ 9290760 (+)
CI01000013_09430170_09443518 RBM28 coding downstream 447669 9430170 ~ 9444023 (+)
G82526 NA non-coding upstream 71597 8910397 ~ 8910626 (+)
G82503 NA non-coding upstream 136163 8834072 ~ 8846060 (+)
G82453 NA non-coding upstream 281384 8700616 ~ 8700839 (+)
G82155 NA non-coding upstream 676821 8252713 ~ 8305402 (+)
G82612 NA non-coding downstream 82632 9065133 ~ 9074576 (+)
G82620 NA non-coding downstream 154482 9136983 ~ 9138445 (+)
G82638 NA non-coding downstream 254487 9236988 ~ 9237208 (+)
G82639 NA non-coding downstream 256880 9239381 ~ 9239585 (+)
G82168 NA other upstream 940880 8028338 ~ 8041343 (+)
G81994 NA other upstream 1643984 7335945 ~ 7338239 (+)
CI01000013_06076169_06080164 NA other upstream 2899856 6075400 ~ 6081684 (+)
CI01000013_06050285_06059640 NA other upstream 2922727 6049864 ~ 6060269 (+)
G80845 NA other upstream 4145991 4835078 ~ 4836232 (+)
G82581 NA other downstream 346828 9329329 ~ 9334948 (+)
G84005 NA other downstream 619110 9601611 ~ 9602235 (+)
G84194 NA other downstream 1048107 10030608 ~ 10036953 (+)
G84215 NA other downstream 1093953 10076454 ~ 10079336 (+)
G84250 NA other downstream 1232626 10215127 ~ 10215962 (+)

Expression


Co-expression Network