G308465



Basic Information


Item Value
gene id G308465
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NW_019172850.1
NCBI id APWO02000117.1
chromosome length 3115925
location 1817060 ~ 1819101 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU424650
GTAGCTGCACCACTGCACTTTCTCTGTTAGTGGAGAGATAGTGTAAAGTCTGCTCTCCGTAATACGACGCTCCAGTCTTATCCACCTCAGTGCTGGCCGTCACCAAAACTGCACTGGCtTTTTTTGTTCCACAGCATGTTCACTCTGTCAGCTTTAAAGAAGCTCTTGTTGGCCAGAGCTGAAGAGGGGCCGCTGAAGTTAGGGTACTGATAGAGCCGCACAAACGACGGAGCACCTTTACTTCCAGGAACATAGACAGAAACCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU424650 True 265 lncRNA 0.49 2 1817060 1819101

Neighbor


gene id symbol gene type direction distance location
LOC103029868 NA coding upstream 26184 1787316 ~ 1790876 (+)
omp omp,ompa,LOC107660685,LOC107735103 coding upstream 66817 1745320 ~ 1750243 (+)
LOC103038299 gdpd4a,LOC108431176,LOC108264809,LOC107735911,LOC107660699 coding upstream 182851 1585462 ~ 1634209 (+)
pak1 pak1 coding upstream 252596 1461963 ~ 1564464 (+)
clns1a clns1a coding upstream 368330 1440770 ~ 1448730 (+)
LOC103031553 pcyt1a,LOC108440592,LOC108264716,LOC107091881 coding downstream 15576 1834677 ~ 1847584 (+)
cstf3 cstf3,LOC107671440 coding downstream 257500 2076601 ~ 2112984 (+)
eif3m eif3m,LOC107602127,LOC107671036 coding downstream 402868 2221969 ~ 2236883 (+)
pex16 pex16,LOC107753012,LOC107669959,LOC106593118 coding downstream 1174967 2994068 ~ 3009972 (+)
LOC103038331 LOC108433450 coding downstream 1200058 3019159 ~ 3035820 (+)
G308459 dcun1d5,LOC107712802 non-coding upstream 10223 1796858 ~ 1806837 (+)
G308453 NA non-coding upstream 32307 1771904 ~ 1784753 (+)
G308448 capn5,LOC108264643,LOC106535735,LOC107713096,LOC107665347 non-coding upstream 76036 1737440 ~ 1741024 (+)
G308444 NA non-coding upstream 171889 1643834 ~ 1645171 (+)
G308441 NA non-coding upstream 185058 1631159 ~ 1632002 (+)
G308470 NA non-coding downstream 35540 1854641 ~ 1910645 (+)
G308474 NA non-coding downstream 43797 1862898 ~ 1934118 (+)
G308501 rnpepl1 non-coding downstream 178132 1997233 ~ 1998747 (+)
G308521 NA non-coding downstream 268007 2087108 ~ 2088169 (+)
G308552 NA non-coding downstream 375890 2194991 ~ 2195304 (+)
G308090 NA other upstream 1630985 185337 ~ 186075 (+)
serp1 NA other downstream 8803 1827904 ~ 1832674 (+)
G308506 abcc5,LOC106580650,LOC107670605,LOC107671530,LOC107672635 other downstream 198363 2017464 ~ 2020131 (+)
G308535 depdc7,LOC107758055,LOC107576633 other downstream 311978 2131079 ~ 2143963 (+)
G308643 kifc3 other downstream 500790 2319891 ~ 2338166 (+)
G308680 NA other downstream 737226 2556327 ~ 2556569 (+)

Expression



Co-expression Network