G308668


Basic Information

Item Value
gene id G308668
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172850.1
NCBI id APWO02000117.1
chromosome length 3115925
location 2440889 ~ 2469996 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU424915
agcagatgacagacatgtctctccaatccatcactgatcatcagtaaattttacatttcatttgtaaatcaagggagcagagtctggaggaagagtggagagacacacagtccaaactgctcgaggtctagtgtgaagtttccaccaatcagtgatggtttggagagtcatgtctgtcatctgctgctgttgatccactgtgttttattatcaagtctaaaatcagtgcagttttgttttcccacaaaatcttacagca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU424915 True 259 lncRNA 0.41 2 2440889 2469996

Neighbor

gene id symbol gene type direction distance location
eif3m eif3m,LOC107602127,LOC107671036 coding upstream 204006 2221969 ~ 2236883 (+)
cstf3 cstf3,LOC107671440 coding upstream 327905 2076601 ~ 2112984 (+)
LOC103031553 pcyt1a,LOC108440592,LOC108264716,LOC107091881 coding upstream 593305 1834677 ~ 1847584 (+)
LOC103029868 NA coding upstream 650013 1787316 ~ 1790876 (+)
omp omp,ompa,LOC107660685,LOC107735103 coding upstream 690646 1745320 ~ 1750243 (+)
pex16 pex16,LOC107753012,LOC107669959,LOC106593118 coding downstream 524072 2994068 ~ 3009972 (+)
LOC103038331 LOC108433450 coding downstream 549163 3019159 ~ 3035820 (+)
cep126 NA coding downstream 600240 3070236 ~ 3107407 (+)
G308662 NA non-coding upstream 11588 2417911 ~ 2429301 (+)
G308659 NA non-coding upstream 27056 2410677 ~ 2413833 (+)
G308658 NA non-coding upstream 30274 2407912 ~ 2410615 (+)
G308649 NA non-coding upstream 30909 2354127 ~ 2409980 (+)
G308645 NA non-coding upstream 139651 2300942 ~ 2301238 (+)
G308679 NA non-coding downstream 77603 2547599 ~ 2547864 (+)
G308681 NA non-coding downstream 87086 2557082 ~ 2557382 (+)
G308682 NA non-coding downstream 90910 2560906 ~ 2561170 (+)
G308683 NA non-coding downstream 102408 2572404 ~ 2572789 (+)
G308685 NA non-coding downstream 129327 2599323 ~ 2599554 (+)
G308643 kifc3 other upstream 102723 2319891 ~ 2338166 (+)
G308535 depdc7,LOC107758055,LOC107576633 other upstream 296926 2131079 ~ 2143963 (+)
G308506 abcc5,LOC106580650,LOC107670605,LOC107671530,LOC107672635 other upstream 420758 2017464 ~ 2020131 (+)
serp1 NA other upstream 608215 1827904 ~ 1832674 (+)
G308090 NA other upstream 2254814 185337 ~ 186075 (+)
G308680 NA other downstream 86331 2556327 ~ 2556569 (+)

Expression


Co-expression Network