G308682


Basic Information

Item Value
gene id G308682
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172850.1
NCBI id APWO02000117.1
chromosome length 3115925
location 2560906 ~ 2561170 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU424929
aaaaaagatggacgccgtgtcgccgttcccattcattcaataaaaatgaagctaaaatcttcctccatgttggcgatcctgatacccgagtctgtagagcgcagtagagaccagaggagggagaaagactgtggatagcagcctactcatttaaataaccccgcccctgagggctgcctcgaggtcacaggctgcagagcggagcggagctgacggtctgttattggtcccgcccataaccagcccttttacaataaccacacct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU424929 True 265 lncRNA 0.52 1 2560906 2561170

Neighbor

gene id symbol gene type direction distance location
eif3m eif3m,LOC107602127,LOC107671036 coding upstream 324023 2221969 ~ 2236883 (+)
cstf3 cstf3,LOC107671440 coding upstream 447922 2076601 ~ 2112984 (+)
LOC103031553 pcyt1a,LOC108440592,LOC108264716,LOC107091881 coding upstream 713322 1834677 ~ 1847584 (+)
LOC103029868 NA coding upstream 770030 1787316 ~ 1790876 (+)
omp omp,ompa,LOC107660685,LOC107735103 coding upstream 810663 1745320 ~ 1750243 (+)
pex16 pex16,LOC107753012,LOC107669959,LOC106593118 coding downstream 432898 2994068 ~ 3009972 (+)
LOC103038331 LOC108433450 coding downstream 457989 3019159 ~ 3035820 (+)
cep126 NA coding downstream 509066 3070236 ~ 3107407 (+)
G308681 NA non-coding upstream 3524 2557082 ~ 2557382 (+)
G308679 NA non-coding upstream 13042 2547599 ~ 2547864 (+)
G308668 NA non-coding upstream 90910 2440889 ~ 2469996 (+)
G308662 NA non-coding upstream 131605 2417911 ~ 2429301 (+)
G308659 NA non-coding upstream 147073 2410677 ~ 2413833 (+)
G308683 NA non-coding downstream 11234 2572404 ~ 2572789 (+)
G308685 NA non-coding downstream 38153 2599323 ~ 2599554 (+)
G308712 NA non-coding downstream 51568 2612738 ~ 2612952 (+)
G308715 NA non-coding downstream 52277 2613447 ~ 2678370 (+)
G308714 NA non-coding downstream 115629 2676799 ~ 2678205 (+)
G308680 NA other upstream 4337 2556327 ~ 2556569 (+)
G308643 kifc3 other upstream 222740 2319891 ~ 2338166 (+)
G308535 depdc7,LOC107758055,LOC107576633 other upstream 416943 2131079 ~ 2143963 (+)
G308506 abcc5,LOC106580650,LOC107670605,LOC107671530,LOC107672635 other upstream 540775 2017464 ~ 2020131 (+)
serp1 NA other upstream 728232 1827904 ~ 1832674 (+)

Expression


Co-expression Network