Gene
RNA
| Item | Value |
|---|---|
| gene id | G84867 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000013 |
| NCBI id | null |
| chromosome length | 12551977 |
| location | 12376889 ~ 12377247 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: zinc finger homeobox protein 3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU96604 | True | 359 | lncRNA | 0.49 | 1 | 12376889 | 12377247 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000013_12314589_12315317 | RGS9BP | coding | upstream | 61380 | 12313175 ~ 12315509 (+) |
| CI01000013_12272623_12275499 | NIP7, NIP7.L | coding | upstream | 101168 | 12272623 ~ 12275721 (+) |
| CI01000013_12260938_12264631 | NA | coding | upstream | 112258 | 12260938 ~ 12264631 (+) |
| CI01000013_12099659_12100829 | GCSHA, GCSH | coding | upstream | 275613 | 12097363 ~ 12101276 (+) |
| CI01000013_11937264_11960076 | IQSEC3B | coding | upstream | 416563 | 11936811 ~ 11960326 (+) |
| CI01000013_12379804_12398839 | NA | coding | downstream | 2274 | 12379521 ~ 12398839 (+) |
| CI01000013_12459982_12465113 | PDCD10, PDC10, PDCD10B, PDCD10A, PDCD10.S | coding | downstream | 82735 | 12459982 ~ 12465573 (+) |
| CI01000013_12536762_12549569 | NA | coding | downstream | 159515 | 12536762 ~ 12550015 (+) |
| G84820 | NA | non-coding | upstream | 143105 | 12233246 ~ 12233784 (+) |
| G84775 | NA | non-coding | upstream | 238779 | 12137191 ~ 12138110 (+) |
| G84769 | NA | non-coding | upstream | 245355 | 12127831 ~ 12131534 (+) |
| G84741 | NA | non-coding | upstream | 281430 | 12047870 ~ 12095459 (+) |
| G84736 | NA | non-coding | upstream | 335976 | 12039518 ~ 12040913 (+) |
| G84879 | NA | non-coding | downstream | 42656 | 12419903 ~ 12420119 (+) |
| G84898 | NA | non-coding | downstream | 99404 | 12476651 ~ 12476877 (+) |
| G84899 | NA | non-coding | downstream | 101006 | 12478253 ~ 12478528 (+) |
| G84919 | NA | non-coding | downstream | 145627 | 12522874 ~ 12524980 (+) |
| G84864 | NA | other | upstream | 984 | 12365049 ~ 12375905 (+) |
| G84790 | NA | other | upstream | 174914 | 12184942 ~ 12201975 (+) |
| G84768 | NA | other | upstream | 206071 | 12169989 ~ 12170818 (+) |
| CI01000013_10756927_10790192 | FRMD4A | other | upstream | 1592132 | 10756927 ~ 10792761 (+) |
| G84250 | NA | other | upstream | 2160927 | 10215127 ~ 10215962 (+) |
