G60809


Basic Information

Item Value
gene id G60809
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 52460025 ~ 52511578 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU82017
ATTATAATACTGGTCAGTCTGATTTTTTTCCCTGTAGACTGGCGTGATAGTAACTACAGATGCCTTTTTTTAGTTTCACTTTTTTCAGTCATTATTATCATGAAACCTTCCTAAATCCCACTGAACACCATCAACTAATCCTCAATTCAAATGTACTCTATTAAAGCCAGCTTATCCGTCACCTCCCCCAAACACTCCAACCCACACAGCAGGTCAAAATCCAGCCACAGAACAGGCCCAGTCCTGAGGGAACTGCAGGCAGACGTACACTTTTAGGTTAAAACATAGATTTCCaaatatgtatgtgtttttttttcactttcagttttagaACTTAATTATTAGGTCCTACATTAGAAGTATTAGCAATAGAATAtgactctctgaagcagatatacagttctgaaaaaaataagagaccacttaaatagatgaatttctttgattttaccaaattaaaaacctctggaatataatcaagaggaagatggatgatcacaaaccatcaaaccaaactgaactgcttaaatttttgcaccaggagtaaagcagcataaagttattcaaaagcagtgtgtaagactggtggaggagaacatgatgccaagatgcatgaaaaacagggttattccaccaaatattgatttctgaactgttaaaattttatgaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82017 True 670 lncRNA 0.36 2 52460025 52511578

Neighbor

gene id symbol gene type direction distance location
LOC103027804 NA coding downstream 5716 52433660 ~ 52454309 (-)
LOC103027481 LOC103027481,LOC108440541 coding downstream 37023 52346378 ~ 52423002 (-)
LOC103026406 abcd1,LOC108265308,LOC108440542,LOC107674359,LOC107701814,LOC107727428,LOC107552221,LOC107743108 coding downstream 126940 52310329 ~ 52333085 (-)
plxnb3 plxnb3,LOC108265307,LOC107727420,LOC107674349,LOC107701812,LOC107584917 coding downstream 152222 52158562 ~ 52307803 (-)
LOC103025375 srpk3,LOC107743111,LOC107601770,LOC107727421 coding downstream 306873 52131931 ~ 52153152 (-)
G60805 NA non-coding downstream 41022 52418708 ~ 52419003 (-)
G60798 NA non-coding downstream 193592 52258127 ~ 52266433 (-)
G60781 NA non-coding downstream 267199 52125475 ~ 52192826 (-)
G60782 tsr2,LOC107743119,LOC107727422 non-coding downstream 331878 52126117 ~ 52128147 (-)
G60780 NA non-coding downstream 336967 52120823 ~ 52123058 (-)
G60627 NA other downstream 751913 51706338 ~ 51708112 (-)
LOC103045940 slc6a6a,LOC108441104,LOC108264963,LOC107714566,LOC107696920,LOC107552205 other downstream 879391 51539498 ~ 51580634 (-)
LOC103032656 LOC108413501 other downstream 951445 51416220 ~ 51508580 (-)
G60441 NA other downstream 1627825 50827695 ~ 50832200 (-)
LOC103046211 ski,skia,LOC108410624,LOC107599811,LOC107657901,LOC107699765,LOC107548407 other downstream 1829861 50565289 ~ 50630164 (-)

Expression


Co-expression Network