CI01000016_02528921_02540450


Basic Information

Item Value
gene id CI01000016_02528921_02540450
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 2528146 ~ 2540652 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_02528921_02540450.mRNA
GTATAAATGAATATTATAGATGAAAACATATTTACATTCAATGTTTACAGAGCTAAAAGCGTTGATAATGTAATTTGGATTCGCAGCTGTTAGAGTAAGATTCTTTATGCATTTAATCAAATCACTAAAGCCAATAAAAATATATCAGCCCTGCCAAACAGCTGAGTCACAATATGGAGCAGAATTGTCTTCAAATGAGATGCAAATTAAATAGAGCCTTGACAACTGCATGCTGTAAATTTGCGTTTAGAACTCATCAGAACTCCTTTTGGAAACTGTAAATATGTCCGCTGTTTGCATTTTCCTTATAATTTCTACTAAGCTTTTTATCTGTTCAGCTTTAAACACATTACGCCAGCTTAATATATTCTCAGTTTTTTGATTCCAGCATATTTTCAACTATCAAGAGGGTCTCTGTGGTTTCATTTACATTAGTTAATTTCCTGTGTGCTTTACATGTCATTATATTTTCATAACTGACTCCGGAAATCTTGGGATGTAATAAAAATGATGTGGACTTTTACAGAGCAGTTTGATTGTTCTTACATTATGGTGGAATTTAATTTCAAAGTCTGTTCTGTATTTATATATGGTGTATTGATATCTGAACACGGACCATGATATGTTGTTGATATTGCATAAAAATATCTTGATGATCTTCAAAAGATTATCATGTTTCTCATTGTAAGCATTGGCTGATAATCAGATGATTGCTTATTTTCACTTTGTGTCTTATCAGACAGAATTTGAGCAGTTATCAATGTGACCTGCTCTAATGTATCTTGCCATCGTTCTTTCTTACTCCCGACTCAGCTGCTGTTCCTTTGATGACTGTAAACTGACTACAGAATGGCTGCTGAGCAGGACGAGACACAGGCCAAAGATAGCTATTGTGTGTGGCTCTGGACTGGGACTTCTCGCAGACAGTGTCTCAAATAAACAGACCATCCGCTATGAGGACATTCCCAATTTCCCAGTGAGCACAGCCATTCATCAATGCTCATGCAAGAAAAGAGGAATCGGCCCCTGGAAAAACAGAGCTATTATTCCAGCAGAACCTCATTACGCTGCAGGTTTTAGGGCCAAACACATCTCATCAGCCAAAATTCAAGGTTATATTTACATAAGCTTCCATTCACTCGGCTCAGTCGGCCTGTTCCCATGTCAAATTCCTGGTCATGAAGGGTGCCTAGTGTTTGGTCAAATCAAAGGCGAGTCTTGTGTCTTCATGCAAGGAAGGTTCCATCTCTACGAGGGTTACTCATTGTGTAAGGTCACGTTCCCTGTGCGGATTTTCAAGCTGATGGGTGTGGAGACCATTATCGTAACAAACGCCTCTGGAGGTCTTTGTCAGGATTTCAAAGTGGGAGACATTATGGTTATTAAGGACCATATTAATTTGCCGGGGTTTGCTGGACAGCACCCACTGTGTGGACCCAATGATGAACGATTTGGGATCCGGTTTCCTTGTATGTCTGATGCTTACAGCAAAGACCTGAGGAAATTAGTTTTGGACATCACTGCTGAGCTTGGCTACTCTAATTTTGTGCGCGAGGGGGTCTACTGTATGGTCAGTGGACCCAACTTTGAGACCATCGCAGAGGCACGCATGCTGCACATTTTGGGGAGCGACTCTGTTGGCATGAGCACGGTTCCTGAGGTGACGGTAGCCAAGCATTGCGGACTGCGGGTCCTGGGCCTCTCGCTCATCACCAACAAGGTTTCTCTTGACTACAGCCGTGAGGAGAAAGTGAATCATGAGGAGGTGCTGCAGATCAGCAAGATGAGAGCTGAGATGCTCCAGAACATGCTCATAACCTTCATCGCTCGCTCTCACCAAGTGGAGACCATCAACAACAACAACTGCATCTACTCAAACACTGTCTAGGGTCAATCAAACCAGTTGAATCAAGGGCGCTGTGGATGTTGCGTGATTGTGGAAGTCATGTGATATATTCAATAGATCTTAAAGGCTCCATGTTATGTTTAGCCTTTATTTATCTGGTTGGTTAAAAATTTCCAATGTTAGACCTCACTGTGCCTTTGGAAAGGATGTATTTGATCTCCAGATTGAGATTGTTGTGTTGTAA

Function

NR:

description
Zgc:77182

GO: NA

KEGG:

id description
K03783 punA, PNP; purine-nucleoside phosphorylase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_02528921_02540450.mRNA True 2090 mRNA 0.41 6 2528146 2540652

Neighbor

gene id symbol gene type direction distance location
CI01000016_02480180_02482592 NA coding upstream 45148 2480180 ~ 2482998 (+)
CI01000016_02457241_02465191 ALDH5A1 coding upstream 62351 2457241 ~ 2465795 (+)
CI01000016_02454540_02455751 ELP6 coding upstream 72349 2454540 ~ 2455797 (+)
CI01000016_02448039_02451863 GABPB2B coding upstream 75827 2448039 ~ 2452319 (+)
CI01000016_02442140_02442481 NA coding upstream 85663 2440075 ~ 2442483 (+)
CI01000016_02559364_02565395 CALB1 coding downstream 18712 2559364 ~ 2566106 (+)
CI01000016_02576551_02588698 PIK3R4 coding downstream 35899 2576551 ~ 2589120 (+)
CI01000016_02662862_02676190 CAPN7, CAN7 coding downstream 121006 2661658 ~ 2676298 (+)
CI01000016_02714495_02719654 NA coding downstream 173760 2714412 ~ 2719746 (+)
CI01000016_02719966_02722011 MRPS15, PL8L1 coding downstream 179314 2719966 ~ 2722191 (+)
G94850 NA non-coding upstream 19255 2508643 ~ 2508891 (+)
G94848 NA non-coding upstream 24704 2503127 ~ 2503442 (+)
G94729 NA non-coding upstream 170038 2357488 ~ 2358108 (+)
G94726 NA non-coding upstream 194554 2330526 ~ 2333592 (+)
G94696 NA non-coding upstream 257012 2199008 ~ 2271134 (+)
G94874 NA non-coding downstream 4099 2544751 ~ 2545005 (+)
G94898 NA non-coding downstream 151031 2691683 ~ 2692011 (+)
G94901 NA non-coding downstream 193096 2733748 ~ 2734245 (+)
G94904 NA non-coding downstream 271691 2812343 ~ 2812551 (+)
G94905 NA non-coding downstream 275437 2816089 ~ 2816299 (+)
G93406 NA other upstream 1600614 905400 ~ 927532 (+)
G95439 NA other downstream 1321523 3862175 ~ 3862305 (+)
G95648 NA other downstream 1731984 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 2293906 4829592 ~ 4837457 (+)
G95792 NA other downstream 2679228 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 2865217 5405791 ~ 5407963 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location