CI01000016_02793868_02796984 (EVA1BA)


Basic Information

Item Value
gene id CI01000016_02793868_02796984
gene name EVA1BA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 2793868 ~ 2797333 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_02793868_02796984.mRNA
ACGAAGGCCCAAGATATTCAGAGAACACGGTCAGAACCAGACTGAGAAGTTTGATCCATCTGAAACAACAGTGCACCATGAGGAGGAACTGACTGCTTTATATGGTTTGGAAACACAGGACAAAGCCAGGATGAATGTGAAAAGGAAGGAGATGGATTTCTTGAGCAACACTATTGCTGCTTATGCTCACATTAAAGCAAATCCAGAGAGTTTCGGGCTTTACTTCGTCATTGGCGTCTGTTTTGGCCTGGTGCTCACTCTCTGCCTCCTGGTCATCAGGATTTCCTGCAAACCTCGTACCACTACAGCGCCCTCCACACCAGAGAAAAAACAGTTAAAAGATTACAGAGGCCTGGAGTCCTCCGTCCGGCACAGCACTACAGAGATCCCCATGAGCAACCACCTCATCACGCCAGATGGGACCCTGAGCAGGAACGTGTTCACCTCAGCCGAGGAGCTGGAGCGGGCACAACGATTGGAGGAAAGGGAAAGGATCATAAGGGAAATCTGGAGAAACGGACAACCGGATATCCTGGGAACAGGGACGGGCACTATTGGAAGAGTGCACTACTACTAAAGGAGCGTGAGACTCCTGGACATAAACACAAGCCATTTCACTGGTTGAGTGCAGTACTTTGGAAGACTGTTAATGAACGCTGTTTCCATTACTTTTTTTTATACATCGGACTGATGTTATTGTAATCCTACAGACATGGGTACAGTTGTTCTGTATGCAACATTTGGACTGGCCAAGTTGCTATCTGTCCTCAAGTCATGGTGCTTATTGAAGAGTCATTCTGACTTTGACGTTTGAGTTGATGTTTTAAAAAGTATTTGTGAATTGTAGGTGATAATTAGAAGCTCACAGAAAGCAAATGCACTTTTGCACCATGCCATTTATTGTTTGTTTTCTGCTATATTTGTAA

Function

symbol description
eva1ba Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human EVA1B (eva-1 homolog B).

NR:

description
Zgc:162212 protein

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_02793868_02796984.mRNA True 926 mRNA 0.45 4 2793868 2797333

Neighbor

gene id symbol gene type direction distance location
CI01000016_02741163_02753993 STK40 coding upstream 39815 2741163 ~ 2754053 (+)
CI01000016_02722831_02730864 OSCP1B, OSCP1 coding upstream 62290 2722831 ~ 2731578 (+)
CI01000016_02719966_02722011 MRPS15, PL8L1 coding upstream 71677 2719966 ~ 2722191 (+)
CI01000016_02714495_02719654 NA coding upstream 74122 2714412 ~ 2719746 (+)
CI01000016_02662862_02676190 CAPN7, CAN7 coding upstream 117570 2661658 ~ 2676298 (+)
CI01000016_02876373_02882129 NA coding downstream 78854 2876187 ~ 2882148 (+)
CI01000016_02918064_02918435 NA coding downstream 120431 2917764 ~ 2918540 (+)
CI01000016_02965137_02979305 SCMH1 coding downstream 167804 2965137 ~ 2979509 (+)
CI01000016_03050072_03055313 CTPS1A, CTPS1, CTPS1B coding downstream 251209 3048542 ~ 3055370 (+)
CI01000016_03056468_03058753 TAF12 coding downstream 259135 3056468 ~ 3059289 (+)
G94901 NA non-coding upstream 59623 2733748 ~ 2734245 (+)
G94898 NA non-coding upstream 101857 2691683 ~ 2692011 (+)
G94874 NA non-coding upstream 248863 2544751 ~ 2545005 (+)
G94850 NA non-coding upstream 284977 2508643 ~ 2508891 (+)
G94848 NA non-coding upstream 290426 2503127 ~ 2503442 (+)
G94904 NA non-coding downstream 15010 2812343 ~ 2812551 (+)
G94905 NA non-coding downstream 18756 2816089 ~ 2816299 (+)
G94858 NA non-coding downstream 20054 2817387 ~ 2822216 (+)
G94906 NA non-coding downstream 33407 2830740 ~ 2832069 (+)
G94908 NA non-coding downstream 38059 2835392 ~ 2835705 (+)
G93406 NA other upstream 1866336 905400 ~ 927532 (+)
G95439 NA other downstream 1064842 3862175 ~ 3862305 (+)
G95648 NA other downstream 1475303 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 2037225 4829592 ~ 4837457 (+)
G95792 NA other downstream 2422547 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 2608536 5405791 ~ 5407963 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location