CI01000016_05426889_05429942


Basic Information

Item Value
gene id CI01000016_05426889_05429942
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 5425776 ~ 5429942 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_05426889_05429942.mRNA
ACTGCACCTAGAGAGCTGGATGAGCTGTGCTACCTCACGGCTCAGTCCATGACATCACTGGTGACATCAGAGCACTTCAAGCTGATCAAAAAGCTGGGAGAGGGGTCGTATGGCAAAGTGATGCTGGCGGTGCATCAGAAGAGAGGAACCCCAATGGCTCTGAAGTTCTTCCCCCGTCGCTCTACCTCTCTCCAAGCTTTCCTGCGTGAATACAATCTGTCTGTCTCCTATTGCACACACCCGTCTCTGACGCGGGCTATAGGCATCTTCTACTCCACGCCTTCTCACTATGTCTTCGCCCAGGAGGCTGGTCTCTATGGCGACCTGTATGATGTCATTGTGTCAGAGGAGGGGGTGAGTGAGGAGTGTGCTCAGCGTGTGATGTCTCAGTTGAGTGGTGCTGTGTCTCACCTGCATTCCCTTGGCTTTGTGCACCGTGACATCAAGCCAGAGAACATCTTCTTGTGTGACCGTGTTTGTCGCTGGGTCAAACTGGGCGACTTCGGCCTGGCGCGGGCACAGGGGACAAAGGTCCGTGCTGTGTGGTACAACTCCCCTTTCTGTGTGCCCGAGATGGAGTGCGCTAAGACAGTCAATGAGGCAGAGGAGGAAGCAGAGGACATCTGGATGTCCGTGGAGCCCAGTTTGGATACTTGGGCTTTAGGGATCCTCATATACTGCCTGCTGACGAGCTGCTTTCCCTGGGAGGAGACCACTTCTGATGACCCTTCCTACTGCAAGTACAGAGACTGGTTCAATCAAACCAAACAGAGAGAGGAGAGGGTCAGAGGACAGAACGGACTGAGGGAGGGAGATCATTGTGAAAAGCAAAACACTGTGAGAGAGGAGAATGAGGCTGAATTAGAAGTTGCCCCTCAGTTTGACTCTTTAAGCTCATTCGTCCTCATTCTTCTGAGAAAGCTGCTAAACCCGCTGCCCTGGCTTCGCCCCGGGCCTGAAGAGATCCTGTCCTACCTTGGAGGACCTTGGTTGCTGAAGACAGAGAAAGAGGAGATGAGGAGAGAGCAGGAGGCGCACATGGAGGCCAAGAAGATCCACGAGAGAGGAGGGGTGGAAGAGGGAAAAGAGATATTGGGAAGGAGGGAGAGATAAAGTTAATGTATGACAGCAATATTATAAACAGATGTACTTTATATTCAAGAGTTTTTATATAGTGTTTATATTTTGGAATATTAGTTTTTTTTTACAAATAGACTAGTTTTTATAAAAATAACTTGATGTATAAGTAGACTATATGTACAATCAGATGCGTGAACTTTTTAACACACACTTGTACAGTGGCCCCTAGAGTGTTTGGACACTTATAATATGAATTATTAATCTAAAATTATTATTAATAATTTTAATTATTAAAGTATTAATGCCATTGCATTTGAGAACAAATTATCCAACCAAGTTGCATTTATTTTAAAGATACTGTAAAGATTTTTTTTAATTGTAAGTAAAATATATAGGCTACTTCAATTCAAAGTTTAGGACTGATTTTGTAATGTAAAGTCTCTTATGTTCACCAATTAAGGCTGCATGTATTTGATCAAATACAGCAATATTGTGGAATATTATTACAATTTAAAATAACTGTTTTCTATTTGAATATATTTTAAAATGTAATTTATTCCTGTGATGGTAAAGCTGAATTTTCAGCATCATTACTCCAGTCTTTGGTGTCAAATCATTCTAATATGCTGATTCGGTGCTAAAGAAACATTTATTATTACCAATGTTGAAAACAGTTGTGCTGCGTAATATTTTTGTGGAAACCATTATCCATTTTTCTGGGTTCTTTGATGAATAGAAAGTTCAATAGAACAGCAGCATTTATTTTATAATAATATTAATAATATTTAACTATGATAGGATTTACCAAAAAAAAAAAAAAAACTTTGTCTTTTGTCTTTTTGGACAACTTATTATTACTATCCAAACACGTCAGCGGTTAATTTTTCATACAAGTATGACTCCAAATACTACAATAATTCAATGTTTCTCCTATTGTGTTGATAATACTGAAACCAGCAATACTTCAATGCCTAATTCAGTTCTTCTCAGGTGCAACGTATAAGCAATCTCTCAACGTGTAGAGAGGTAAATAGGTACTGTAGATGAGGAGCTGCTCATCAGATGTGGGTGGAATACATAAACACTCTCTCTACCTCAAACCAGTTGTTTTGATAGCCGTACCTTGTTTGTTCATGTTTGAATAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_05426889_05429942.mRNA True 2226 mRNA 0.41 3 5425776 5429942

Neighbor

gene id symbol gene type direction distance location
CI01000016_05412782_05415867 NA coding downstream 9909 5412248 ~ 5415906 (-)
CI01000016_05374626_05378364 NA coding downstream 47103 5373845 ~ 5386465 (-)
CI01000016_05325805_05330265 COX6B2 coding downstream 92902 5325519 ~ 5332874 (-)
CI01000016_05313099_05322439 SLC2A3B coding downstream 102829 5312803 ~ 5322947 (-)
CI01000016_05249001_05286683 EPHB6 coding downstream 139093 5247560 ~ 5286683 (-)
CI01000016_05461674_05464777 FOXJ2 coding upstream 31732 5461674 ~ 5464777 (-)
CI01000016_05468882_05473383 ISOC2 coding upstream 38821 5468763 ~ 5473383 (-)
CI01000016_05508930_05523828 CACNG8B coding upstream 78145 5508087 ~ 5523828 (-)
CI01000016_05547222_05557502 CACNG7 coding upstream 117097 5547039 ~ 5557502 (-)
CI01000016_05565004_05596591 PRKCG coding upstream 135026 5564968 ~ 5596591 (-)
G97165 NA non-coding downstream 13856 5411655 ~ 5411920 (-)
G97160 NA non-coding downstream 23407 5402143 ~ 5402369 (-)
G97148 NA non-coding downstream 83976 5341039 ~ 5341800 (-)
G97012 NA non-coding downstream 220963 5192792 ~ 5204813 (-)
G97180 NA non-coding upstream 123353 5553295 ~ 5553986 (-)
G97203 NA non-coding upstream 135255 5565197 ~ 5566153 (-)
G97215 NA non-coding upstream 136351 5566293 ~ 5573569 (-)
G97252 NA non-coding upstream 347462 5777404 ~ 5777668 (-)
G97255 NA non-coding upstream 404628 5834570 ~ 5834911 (-)
CI01000016_04921091_04922518 NA other downstream 502372 4918975 ~ 4922518 (-)
CI01000016_03921124_03930996 NA other downstream 1494725 3920055 ~ 3931162 (-)
CI01000016_03647744_03675574 NA other downstream 1760463 3647653 ~ 3675585 (-)
G97341 NA other upstream 729044 6158986 ~ 6159721 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 other upstream 3458891 8888833 ~ 8894737 (-)
CI01000016_08926089_08945071 NA other upstream 3506847 8925960 ~ 8945229 (-)
G98679 NA other upstream 3805054 9234996 ~ 9239929 (-)
G98691 NA other upstream 3826160 9256102 ~ 9257611 (-)

Expression


Co-expression Network