CI01000016_08090285_08090545


Basic Information

Item Value
gene id CI01000016_08090285_08090545
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 8090285 ~ 8090594 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_08090285_08090545.mRNA
CTCTCCGGAGTTCCTCCTAAACAGCCGATAATATCCAGCTGTGAGAGTCGGATCAGACGGGAGTCGCCAACGCTGCCGCATTTACAGACGCGAGTGTGGCAGCAGAAGAACCATATGGTGAAACTAGTTGATACAACATCAAATATACGTACAGAAAATATGACAACTCATCTACTCGTCATCGTAATGAAATGCAGAATTCAAAAAAACTTCCAAGCCGTTGCGTGCGCTGTCAGTGCCAGTAGGTTTCGCCATATTTAGAGAGAGGGATTTTACTGTATCGCTTCCATGTGCCACTTCAAGGCTTGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_08090285_08090545.mRNA True 310 mRNA 0.46 1 8090285 8090594

Neighbor

gene id symbol gene type direction distance location
CI01000016_08034844_08037586 FKBP14 coding upstream 52260 8034844 ~ 8038025 (+)
CI01000016_07998560_08008403 COLQ coding upstream 81839 7998560 ~ 8008446 (+)
CI01000016_07969424_07983149 HACL1 coding upstream 106984 7968328 ~ 7983566 (+)
CI01000016_07956184_07965721 C16H2ORF66 coding upstream 124345 7956071 ~ 7965940 (+)
CI01000016_07937188_07955977 ANKRD44, ANKRD28B, ANKRD28 coding upstream 133828 7937188 ~ 7956457 (+)
CI01000016_08092843_08098938 CPVL coding downstream 2179 8092773 ~ 8098938 (+)
CI01000016_08205087_08210367 NA coding downstream 114260 8204854 ~ 8211114 (+)
CI01000016_08217170_08228700 JAZF1 coding downstream 126490 8217084 ~ 8228778 (+)
CI01000016_08270091_08279026 HIBADH, HIBADHA, HIBADHB coding downstream 178126 8268720 ~ 8279924 (+)
CI01000016_08285505_08286793 HOXA13B, HOXA13 coding downstream 194565 8285159 ~ 8287361 (+)
G97826 NA non-coding upstream 26975 8058969 ~ 8063310 (+)
G97788 NA non-coding upstream 183727 7906224 ~ 7906558 (+)
G97747 NA non-coding upstream 231104 7847657 ~ 7859181 (+)
G98151 NA non-coding downstream 252517 8343111 ~ 8343467 (+)
G98152 NA non-coding downstream 256098 8346692 ~ 8346893 (+)
G98155 NA non-coding downstream 267429 8358023 ~ 8358279 (+)
G98103 NA non-coding downstream 268051 8358645 ~ 8374582 (+)
G97824 NA other upstream 74510 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 304562 7783987 ~ 7784996 (+)
G96389 NA other upstream 928995 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 2682422 5405791 ~ 5407963 (+)
G95792 NA other upstream 2864344 5219880 ~ 5225941 (+)
G98288 NA other downstream 905504 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 1705037 9795950 ~ 9842576 (+)
G99041 NA other downstream 1833824 9924418 ~ 9925654 (+)
G99410 NA other downstream 2143806 10234400 ~ 10236851 (+)
G99456 NA other downstream 2203797 10294391 ~ 10298904 (+)

Expression


Co-expression Network