G94874


Basic Information

Item Value
gene id G94874
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 2544751 ~ 2545005 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU107965
GCAGCGTTTTCGCACAAAGGTACAGAATTCTGAGGCAGCGTAACGGTTTAATGATCTACAGCAAATTAGAGAGCTTTGGTGAAAACTAAGCAAATATTTAATTACTACAATAGTAATTTCTCACTAGAAATTACATCAAAAGTGGAAAACGTTGGTCAAAAATGTACATTTACACACAAACTGACAACCAACCACAACTTTCAGATGCCATCTTGGGTTAGTTCACCCAAAAATGGAATTTCTATCATTTATTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107965 True 255 lncRNA 0.35 1 2544751 2545005

Neighbor

gene id symbol gene type direction distance location
CI01000016_02528921_02540450 NA coding upstream 4099 2528146 ~ 2540652 (+)
CI01000016_02480180_02482592 NA coding upstream 61753 2480180 ~ 2482998 (+)
CI01000016_02457241_02465191 ALDH5A1 coding upstream 78956 2457241 ~ 2465795 (+)
CI01000016_02454540_02455751 ELP6 coding upstream 88954 2454540 ~ 2455797 (+)
CI01000016_02448039_02451863 GABPB2B coding upstream 92432 2448039 ~ 2452319 (+)
CI01000016_02559364_02565395 CALB1 coding downstream 14359 2559364 ~ 2566106 (+)
CI01000016_02576551_02588698 PIK3R4 coding downstream 31546 2576551 ~ 2589120 (+)
CI01000016_02662862_02676190 CAPN7, CAN7 coding downstream 116653 2661658 ~ 2676298 (+)
CI01000016_02714495_02719654 NA coding downstream 169407 2714412 ~ 2719746 (+)
CI01000016_02719966_02722011 MRPS15, PL8L1 coding downstream 174961 2719966 ~ 2722191 (+)
G94850 NA non-coding upstream 35860 2508643 ~ 2508891 (+)
G94848 NA non-coding upstream 41309 2503127 ~ 2503442 (+)
G94729 NA non-coding upstream 186643 2357488 ~ 2358108 (+)
G94726 NA non-coding upstream 211159 2330526 ~ 2333592 (+)
G94696 NA non-coding upstream 273617 2199008 ~ 2271134 (+)
G94898 NA non-coding downstream 146678 2691683 ~ 2692011 (+)
G94901 NA non-coding downstream 188743 2733748 ~ 2734245 (+)
G94904 NA non-coding downstream 267338 2812343 ~ 2812551 (+)
G94905 NA non-coding downstream 271084 2816089 ~ 2816299 (+)
G94858 NA non-coding downstream 272382 2817387 ~ 2822216 (+)
G93406 NA other upstream 1617219 905400 ~ 927532 (+)
G95439 NA other downstream 1317170 3862175 ~ 3862305 (+)
G95648 NA other downstream 1727631 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 2289553 4829592 ~ 4837457 (+)
G95792 NA other downstream 2674875 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 2860864 5405791 ~ 5407963 (+)

Expression


Co-expression Network