G95524


Basic Information

Item Value
gene id G95524
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 3530583 ~ 3530937 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU108650
GAAAGCCAATGCATTTTTCCCATAGACTTTTGGAAAATCGCAAAAAATAAGCTCTGTGTTTAACAAAGGGTTATGACACTTACACGTTTTGTCTATCAAGATAATCTTTACAAGTTAACACAACATTTATACATTTTGAAGCCTAAATAAAGTCATCAGATATAAAAAGCTAACAGTAGGCTATAAACGGACTACAGCACACCATGGTTGCGGATCAACGTCACCACCACCAAGCTTCCTCAAACTTTATTTAGAAAACAACTTTATTTAAAAACATGCTCGCTGATTATGATCTGCGCTGTGTATGAATACTTATCCACTTTTTCATGAGAAATGCTGTCCAAATGTCCTGTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108650 True 355 lncRNA 0.35 1 3530583 3530937

Neighbor

gene id symbol gene type direction distance location
CI01000016_03503738_03504907 NA coding upstream 25676 3503672 ~ 3504907 (+)
CI01000016_03267301_03268376 NA coding upstream 262192 3265145 ~ 3268391 (+)
CI01000016_03190518_03261836 NA coding upstream 268340 3190166 ~ 3262243 (+)
CI01000016_03158359_03165518 NA coding upstream 364761 3158359 ~ 3165822 (+)
CI01000016_03056468_03058753 TAF12 coding upstream 471294 3056468 ~ 3059289 (+)
CI01000016_03546616_03553250 TUFT1A coding downstream 15679 3546616 ~ 3553749 (+)
CI01000016_03559585_03560912 NA coding downstream 28389 3559326 ~ 3561090 (+)
CI01000016_03565923_03571228 NA coding downstream 34063 3565000 ~ 3571637 (+)
CI01000016_03572467_03575117 AQP10A coding downstream 41530 3572467 ~ 3575187 (+)
CI01000016_03592692_03617887 ATP8B2 coding downstream 61683 3592620 ~ 3617959 (+)
G95522 NA non-coding upstream 2028 3528024 ~ 3528555 (+)
G95521 NA non-coding upstream 6495 3523721 ~ 3524088 (+)
G95520 NA non-coding upstream 7223 3523150 ~ 3523360 (+)
G95518 NA non-coding upstream 18941 3511408 ~ 3511642 (+)
G95386 NA non-coding upstream 119062 3411239 ~ 3411521 (+)
G95494 NA non-coding downstream 102698 3633635 ~ 3633998 (+)
G95533 NA non-coding downstream 138768 3669705 ~ 3727497 (+)
CI01000016_03767260_03771612 NA non-coding downstream 236061 3766998 ~ 3771828 (+)
CI01000016_03798165_03803686 NA non-coding downstream 271603 3798037 ~ 3804627 (+)
CI01000016_03965750_03967383 NA non-coding downstream 403300 3965498 ~ 3967397 (+)
G93406 NA other upstream 2603051 905400 ~ 927532 (+)
G95439 NA other downstream 331238 3862175 ~ 3862305 (+)
G95648 NA other downstream 741699 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 1303621 4829592 ~ 4837457 (+)
G95792 NA other downstream 1688943 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 1874932 5405791 ~ 5407963 (+)

Expression


Co-expression Network