G96034


Basic Information

Item Value
gene id G96034
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 5726845 ~ 5727075 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU109216
TTTCCACACAGATGCGTCATATAGCCTACCGCTCTGCGCTTCGAGAGGGATGTGAGACACGAGCAGGAAAGAGACCATTTCTCTTTAATAATATATCTTCATGTTATCTCCTGATGTTACAAGCAACTGACACTTGTTGTAAAAGGTCTGAAGAGCGAGTCAGACATTCAGACTGTTTGATTTTGCGCTGCCAGAGAGGCGTGTGAAACGTGCTATACAAATAAACTAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109216 True 231 lncRNA 0.43 1 5726845 5727075

Neighbor

gene id symbol gene type direction distance location
CI01000016_05698858_05706081 NA coding upstream 20126 5698858 ~ 5706719 (+)
CI01000016_05488887_05502270 CACNG6B coding upstream 224495 5484205 ~ 5504239 (+)
CI01000016_05475350_05482964 U2AF2, U2AF2A, U2AF2B coding upstream 242899 5475350 ~ 5483946 (+)
CI01000016_05445824_05454816 EPN1 coding upstream 271429 5445824 ~ 5455416 (+)
CI01000016_05405791_05407797 AICDA coding upstream 318882 5405791 ~ 5407963 (+)
CI01000016_05797506_05798075 NA coding downstream 70431 5797506 ~ 5799585 (+)
CI01000016_05828974_05833309 JOSD2, JOS2 coding downstream 101323 5828398 ~ 5833377 (+)
CI01000016_05837368_05837667 NA coding downstream 109508 5836583 ~ 5837927 (+)
CI01000016_05878037_05885761 FLCN coding downstream 150962 5878037 ~ 5886192 (+)
CI01000016_05891870_05892528 NA coding downstream 164795 5891870 ~ 5892679 (+)
G95933 NA non-coding upstream 73210 5649852 ~ 5653635 (+)
G95918 NA non-coding upstream 111355 5610878 ~ 5615490 (+)
G95915 NA non-coding upstream 118936 5607627 ~ 5607909 (+)
G95914 NA non-coding upstream 119502 5606703 ~ 5607343 (+)
G95913 NA non-coding upstream 120572 5605992 ~ 5606273 (+)
G96035 NA non-coding downstream 5182 5732257 ~ 5732463 (+)
G96047 NA non-coding downstream 28563 5755638 ~ 5755894 (+)
G96048 NA non-coding downstream 29022 5756097 ~ 5756378 (+)
G96058 NA non-coding downstream 48985 5776060 ~ 5776310 (+)
G96076 NA non-coding downstream 195686 5922761 ~ 5922984 (+)
G95792 NA other upstream 500904 5219880 ~ 5225941 (+)
CI01000016_04829592_04837305 NA other upstream 890190 4829592 ~ 4837457 (+)
G95648 NA other upstream 1452940 4272636 ~ 4273905 (+)
G95439 NA other upstream 1862988 3862175 ~ 3862305 (+)
G96389 NA other downstream 1433566 7160641 ~ 7161290 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 2056990 7783987 ~ 7784996 (+)
G97824 NA other downstream 2287288 8014363 ~ 8015775 (+)
G98288 NA other downstream 3269023 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 4068556 9795950 ~ 9842576 (+)

Expression


Co-expression Network