CI01000018_00837737_00838788


Basic Information

Item Value
gene id CI01000018_00837737_00838788
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 837550 ~ 838864 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_00837737_00838788.mRNA
CCTCCCCCTTTTATTCAAGTCATTGTATGCATGAATGAATAGCATTTTAATGTACTTGTTAAACTGTCAACTTAAAATGCAGAAGACACACTATAGTCTTGAGCCTCCAGAGCTAACTGTGGGACAGATACTGTGGAAGAGGCTTACAGCAGCCTCTTCAGTTGACGATAATGAGCCTGAAGACAAAATGTCAGCTAGTGAGAACGGGCAGAGACAGGAAGTTAAGGAAATGAAACCAATCAGTGCTGATGGAGAATATGCGAAAGACTTGAAAACAGTCTACCAAGGAAAAGCAAAAAACAAGCGGCGGATGAGAAGAGGGGGTGGGGATGGCAACGAGCTTATGACTGAGATTGAGAGCGAGAGGAGGAGGAGGAGGAGGGGAGATCGACATTCTCTCCTCCCCAGAGCCGCAGGCCTGGTCTCCAGCCACTGTCCCAGATGGCTTGACTGAGAGAGGGAAAGAGAGATGTTCCTGCCACTCATAAGCTCTACAATTACTGAGAACGTAATGGTCTTAAAGTACCGGCATCAAGCAGGCCCAAAAAGCCAACGTCCATTTACCGAAGCCGATCACATTCATGAATCTTTTAAACTGACAGCCACTTCAAGTTGCCACGGGGAGAGCACTGTATAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_00837737_00838788.mRNA True 641 mRNA 0.46 2 837550 838864

Neighbor

gene id symbol gene type direction distance location
CI01000018_00777676_00783256 NA coding downstream 54021 776512 ~ 783529 (-)
CI01000018_00333019_00452055 NA coding downstream 385495 333019 ~ 452055 (-)
CI01000018_00318175_00326190 NA coding downstream 510738 317689 ~ 326812 (-)
CI01000018_00259118_00271046 RDH10, RDH10A coding downstream 566096 257887 ~ 271454 (-)
CI01000018_00229092_00242308 NA coding downstream 595159 228822 ~ 242391 (-)
CI01000018_00985130_00987510 NA coding upstream 146128 984992 ~ 987689 (-)
CI01000018_00992108_01000450 ZFHX2 coding upstream 152582 991446 ~ 1000450 (-)
CI01000018_01030816_01076302 JPH1A coding upstream 190973 1029837 ~ 1076302 (-)
CI01000018_01286376_01296170 NA coding upstream 446724 1285588 ~ 1296170 (-)
CI01000018_01307800_01363530 RTTN coding upstream 468118 1306982 ~ 1363933 (-)
G102955 NA non-coding downstream 25819 809920 ~ 811731 (-)
G102915 NA non-coding downstream 34613 798241 ~ 802937 (-)
G102600 NA non-coding downstream 197056 638352 ~ 640494 (-)
G102590 NA non-coding downstream 219596 617732 ~ 617954 (-)
G102547 NA non-coding downstream 258568 578676 ~ 578982 (-)
G102995 NA non-coding upstream 30331 869195 ~ 869917 (-)
G103028 NA non-coding upstream 110376 949240 ~ 949641 (-)
G103038 NA non-coding upstream 126418 965282 ~ 966010 (-)
G103042 NA non-coding upstream 170539 1009403 ~ 1009641 (-)
G103049 NA non-coding upstream 178797 1017661 ~ 1017881 (-)
G103842 NA other upstream 1120633 1959497 ~ 1960058 (-)
CI01000018_02389202_02488018 CNTNAP2, CNTNAP2A other upstream 1547344 2389201 ~ 2488018 (-)
G104968 NA other upstream 2643240 3482104 ~ 3500514 (-)
G105104 NA other upstream 3168833 4007697 ~ 4017817 (-)
G105200 NA other upstream 3404603 4243467 ~ 4246010 (-)

Expression


Co-expression Network