CI01000018_00318175_00326190


Basic Information

Item Value
gene id CI01000018_00318175_00326190
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 317689 ~ 326812 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_00318175_00326190.mRNA
AGAGCTCTCAATGAAAATGCTTATGTTGTCATTTAAGGAAATATAATTTTATTAATTATTAATTGATTATTTACACAAGGATAAGACAATTAACATCACTGACATTATTATATGTATATAATTAACATGATATGATGGAAATAAGTAGCTAAACCTGGCCACTCAGTGAGGGATTGACTGTTAACTTGCATGATGGTCAATAAAAAGTTGATCATACCAATTTTTGTAATTTTATCAAACAGGATGTAATATTGAATATTCAGACAAACTAGCTAACACAGCACATCACAGAAATCATCATATCCGTTGCTAATTGGCTACTTACTGATGTTTGTGCTAACGTTAGTTCTCCCACCAAAATGATTATGATTCGTCTCATGGTGGAAGTTAGTGCATATTATGCCTAAATGGGGACACGGCAAAAATCAAAGCAAAGTGCTATAAAATTCACCTTAGAGTTCACTTAGTTGTGATATTGTGAGAAAAGAAAACTGTTATTCAATACCTAAGATTCGTTATAATTGTTTCTTCCCCGCCGGAAGGGGGCGCTGTGACCAGAGCTTCTGATAAACTCCGCCCGCACAACAAAGTTGGCGGGAATGTTTGTTATCCTTGCATAAACATGAATATGGAGTGCGCGTCACAAGAGATATCGAGCTCAAATGAAAACACGAATTTAGTTGGAGTCGAAAGTGTTGTTCAATCATGGATGATCGATTATTATTTCGCGACACTATGTCGGCACTTCAAAGCAAGATCTGCGCCGGAGTTTCATAAAGCTTTAAAAATATTTGAAGCATTGGTGGATGAGCTCGAGTCATGTTCCCACAGGTCAGATCATCCTTCTCAGAGAACGATCTGCTGTTTGCTTGCCAGAGTGATAGACGGGGAAAACCTGGCTCTGCCGATTTGGGAGTCATTAAAGGAAGCATCCGATACAGCTTTACACACTAAGATCAAGACGCTACTGATTGTTCAGAAAGGGAATTCACAGTTGGCAAAGGAAACCCTGCAGTGGCTGGAAAAAGAGACTGAAATACCAGAGAAACTACAAGGAAAGCTTACCACCATTGTGAGTAAGAAAGATGCATATGATCAGCTTCTGATGAACCTCACTTTCGACCAGCTGTTGGAGAGCATTGACGTGTTCCTCGACACATTCAGTCTGGAAAGAAATGAGAAACAGGTGGATCCACTGGTGCAAAATATGAGGCACAAAAGGAAACTTCTTTCCACACAAACGAATGACCTGTGGAAACCAGAAACTGCAAAGAAAGAGCGAACCACATGCAAGAGAACCTCCATTTGCAAGGTTTCTAGGAGAAGTAGTAGCCCTTCGGAATTACAAAGCAATGTTAGTGTGATGAGCAAAATCAGGAGGAAGTGGACTGTGGAAGAAGATAGGAAGCTGAAAGCAGGTGTGAGGAAGCATGGAGAAGGTAACTGGAGAATGATCCTGAATGACTATGAGTTTAACAACCGCACCGGTGTTAATCTTAAGGATAGATGGAGAACCCTGAAGAGTAAGGGAGAGGACTTCTGAGCTGCTGCTGCCTTTATTTTATTTATTTTTTTTATTGTATTTTAGGACCTTTAGACTTTAAAGTTTTCATTTTTTGACCTGTGCTGATTTCAAATTCAGCAGTGCCTTTCTTTTGTAAATTAAAAGTTCAAAAATACCATTTGGCAGAACAGTATTGCTAATGAGTTGTATAATAACTTTCAAAGTGTCCTGTTGCTGTTTGTTTGACCTGTAAGGCCAACATTTGTCCAGTAGAGGATGCAAGTGAGACATATGAAAGCTTTGTTTGCCTTTAATTCTGTTCCTGGATTTATTTTACAGAAAGAAAAAAAAAAGTTTATTTGAAAAAATACTGTACAAAAAAAAACTAAAGAGCTTTTATTAAATGTGTGTAAATGTGTTTTTGTTTTTTTTTTAATATATATGTGTAATAGAACATTTTGCTCATTTGTGGATTTTAACAAGGAGTTTGAAGAAGCATCTTTATTTATAGACCGTTTAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_00318175_00326190.mRNA True 2029 mRNA 0.37 9 317689 326812

Neighbor

gene id symbol gene type direction distance location
CI01000018_00259118_00271046 RDH10, RDH10A coding downstream 46235 257887 ~ 271454 (-)
CI01000018_00229092_00242308 NA coding downstream 75298 228822 ~ 242391 (-)
CI01000018_00207988_00210462 NA coding downstream 105360 207970 ~ 212329 (-)
CI01000018_00071464_00083422 DCAF11 coding downstream 234267 71408 ~ 83422 (-)
CI01000018_00064269_00068791 NA coding downstream 246613 63585 ~ 71076 (-)
CI01000018_00333019_00452055 NA coding upstream 6207 333019 ~ 452055 (-)
CI01000018_00777676_00783256 NA coding upstream 449700 776512 ~ 783529 (-)
CI01000018_00837737_00838788 NA coding upstream 510738 837550 ~ 838864 (-)
CI01000018_00985130_00987510 NA coding upstream 658180 984992 ~ 987689 (-)
CI01000018_00992108_01000450 ZFHX2 coding upstream 664634 991446 ~ 1000450 (-)
G102477 NA non-coding downstream 18266 295214 ~ 299423 (-)
G102403 NA non-coding downstream 152024 165223 ~ 165665 (-)
G102402 NA non-coding downstream 152981 163795 ~ 164708 (-)
G102344 NA non-coding downstream 266546 50766 ~ 51143 (-)
G102491 NA non-coding upstream 11323 338135 ~ 338625 (-)
G102495 NA non-coding upstream 136099 462911 ~ 463149 (-)
G102498 NA non-coding upstream 149262 476074 ~ 476388 (-)
G102503 NA non-coding upstream 167977 494789 ~ 495146 (-)
G102528 NA non-coding upstream 232128 558940 ~ 559318 (-)
G103842 NA other upstream 1632685 1959497 ~ 1960058 (-)
CI01000018_02389202_02488018 CNTNAP2, CNTNAP2A other upstream 2059396 2389201 ~ 2488018 (-)
G104968 NA other upstream 3155292 3482104 ~ 3500514 (-)
G105104 NA other upstream 3680885 4007697 ~ 4017817 (-)
G105200 NA other upstream 3916655 4243467 ~ 4246010 (-)

Expression


Co-expression Network