CI01000018_00207988_00210462


Basic Information

Item Value
gene id CI01000018_00207988_00210462
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 207970 ~ 212329 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_00207988_00210462.mRNA
ACATCCCAATATAACTACCTCATGTGATTCCACCCACGAGTCTTTCAGTGTGACCAGTCTAGGGTCAGTGAAAATCCAGCTGCTTCTATTAGGCAAGAAACTGCAGGAAACGTTTTGGGGGAAACCACATGACAAACACTCCAACACAATACTAACTTCAAGAACTTTTAGCGTGTTTTTTGTGTGTGTGTGTGTACATATGTAGATGCCTATTTTATTCTAATTTATAGGCATCTGCCTATAGCAATGATGATGAAATAAGCAAGAAAAAAATAGGCAAAACAGCTTTTATGTATGCATTCTTGTTATTCTTATCTTTAACATTTACAGAATAGTTAGCTCTTTTTAGTGTTTATACTACCATTCAAAAGTATGTTTTTTTTTTTTTTGTTGTTGTTTTTTTTGGAAAAAAATTAATACTTTTATTCCACAAAGATGCATTCAATTGATTCAAAGTTACTGTAAAGACATTTATAATGTTACAAAAGATTTCTATTAAAAAATGCTATTCTTTTGAACTTTTGATTTATCAAAGAATCCTGAAAAAATAAATATATATTAGGTTTCTACAAAATATTAAGCAGCACAACAGTTTTCAACATTAATAATAATAAGAAATGTTTCTTTAGCACCAAATCAGCATATAAGAATGATTTCTGAAGGATCATGTGACACTGAAGACTGGAGTAATGATGCTGAAAATTCAGCTTTGTCACTGCAGGAATAAATTATGAAAATAGAAAACTGTTTTTAATATTAATAATATTTCACAATATTACTGTTTTTACTGTATTTCTGATCAAATAAACGCACCCTTTGTGAGCATACAAAACATCCTTTCAACCACAACCATTTGAAAGGTATTGTATAATTTTATAATCCCTAGCTCCAGTTGATTTGTTCTAAAACCATCTTAAAGATAAAAATATTATTAATTTGCTGTAGTGTAGCCAATGCTTGAAATGGGCCGGTATGCGCCGGTACGCAGTACCTTTAGCGTACTGCCAGTTTTCCTTGCGTACTGGCACTTCCGACATGTTACATGTACGGAAGCCCGCCACGCCCTCCCTTCTTCAGGAACGCCTTTTGAACTGAGCATCGGGAGTACCGGCACTTTTATTTTTCCACTTTAAGAGTGTAGCACACTAGCTGAGTCAAAATTCCATAATATTTCCATATTAGAACGTGTTGGATAATCCTTCCCAAACCATGTCTGTTATAATTTAGAATTGAATTTTGCTTAATTTGCCCAAAGCCTTTATAATATAGAATGGTTTGAGCCCATTTTTAACATACCCAAAGATCAGCTATAAACATCACACTATTTTACTACTATATTTTGTAAAGTATTTTTAGAACGTAATATGAACTTCTCTCATCATGCCATTCATTTAACAGGTTTTGCTCTGTAGATTTTAAAACACAATTAGCCTTGGAAAAATAATCCTCTTCGAAAAATAATCCTCCTCCAAACAATGAAGATTAGGCAAGGCCCTTTTGGTTTTGTTTTTACATAAACGGATTTCCTACAGGTGCCGTTGTAGGCGACACAGACATTATGCAAGGCTTAGCCCGTGTCAAAGAGAGAAGACGAGAACAGCTGCCGAGTTGAGTAACATGCCGAGACCCCTGACAGAGGCGGCCTGCTGTACTAACGTCTCCAGCCCTGGGCCGGAGAAGACTTCAAACGGCCCAGCACCCGGCGGGAGATCTTCTGAAGATGGACGCAGCAGCCTCTCGGCCATGAATCAGGCCTGTCAATAGCTGCCCATCCTCTCAACAGGTGTCCGAATTGTCGCACAATCACTTTCTCCTCGCTTGACATAATGAAAGAGCCATTTTCCAACAAGAGGAAAGCATTCTCACCATGAACGAGTTCTCTGTTGCAAACAAACAAGCACATAATGAAACATACAAGATCCAAGGGCTACAATTAATTGCTCCAGAACAATGTCTCAGTTCTGGACTCAGCTTGAAGGCTGGATGCAAAGGCTCTTGGGAAAAGAGCAGCCAGCTGAGCACAGCGTGCACACGCAGCAGCAGCCAAATTCGCCCTGTCACATTCGATTTCAGGGCCTCCATGTTGTATAAGCAACACCTCATGCAAGGCTCTGAATGCACATGGAGGGCCAAGGATCAGGGCAGGAGGGGCGTCAGGCTATGGGGGCTTGGGGCCTTCTTTGGCAGTGAGAAAGAGCAGGGCCCTAGGCCCTGTGAACTGACAGGCTCTGCAGGAGCCAGGAAAGTGCAGGAGCAACTCTACACGCCTCTCTGCAGGACTCTGTCAATTCTACCAATGAGTAAGTGTCAAAAAGTGACCTGGGACAGCTATGGGGAACCATCACGTGGATTACAGCCACTCAATGTTCAACATCCTAATGCTGTCTGTGATATTTATGACACAAAATATAGTGTGGCTGGTTTAAGAAGCTAAATCAAGAAGACAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_00207988_00210462.mRNA True 2452 mRNA 0.40 3 207970 212329

Neighbor

gene id symbol gene type direction distance location
CI01000018_00071464_00083422 DCAF11 coding downstream 124548 71408 ~ 83422 (-)
CI01000018_00064269_00068791 NA coding downstream 136894 63585 ~ 71076 (-)
CI01000018_00029420_00038887 PCK2 coding downstream 169083 28870 ~ 38887 (-)
CI01000018_00229092_00242308 NA coding upstream 16493 228822 ~ 242391 (-)
CI01000018_00259118_00271046 RDH10, RDH10A coding upstream 45558 257887 ~ 271454 (-)
CI01000018_00318175_00326190 NA coding upstream 105360 317689 ~ 326812 (-)
CI01000018_00333019_00452055 NA coding upstream 120690 333019 ~ 452055 (-)
CI01000018_00777676_00783256 NA coding upstream 564183 776512 ~ 783529 (-)
G102403 NA non-coding downstream 42305 165223 ~ 165665 (-)
G102402 NA non-coding downstream 43262 163795 ~ 164708 (-)
G102344 NA non-coding downstream 156827 50766 ~ 51143 (-)
G102445 NA non-coding upstream 27227 239556 ~ 337952 (-)
G102477 NA non-coding upstream 82885 295214 ~ 299423 (-)
G102491 NA non-coding upstream 125806 338135 ~ 338625 (-)
G102495 NA non-coding upstream 250582 462911 ~ 463149 (-)
G102498 NA non-coding upstream 263745 476074 ~ 476388 (-)
G103842 NA other upstream 1747168 1959497 ~ 1960058 (-)
CI01000018_02389202_02488018 CNTNAP2, CNTNAP2A other upstream 2173879 2389201 ~ 2488018 (-)
G104968 NA other upstream 3269775 3482104 ~ 3500514 (-)
G105104 NA other upstream 3795368 4007697 ~ 4017817 (-)
G105200 NA other upstream 4031138 4243467 ~ 4246010 (-)

Expression


Co-expression Network