Fish Transcriptome and Expression Database

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model fish

XLOC_008066 (CABZ01014721.1)

Basic Information

Item	Value
gene id	XLOC_008066
gene name	CABZ01014721.1
gene type	non-coding
species	zebrafish (Danio rerio)
category of species	model fish

Chromosome Information

Item	Value
chromosome id	NC_007125.7
NCBI id	CM002898.2
chromosome length	52660232
location	40542910 ~ 40543026 (-)
genome version	GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00015765
TgctacagccatatcaccctgcagctcaagaccagttattcactgaagctaagcagggctgagcctggtcagtacctagataGGGGAccgcatgggaaaactaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id

ENSDARG00000112214

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
TCONS_00015765	True	117	rRNA	0.51	1	40542910	40543026

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

gene id	symbol	gene type	direction	distance	location
XLOC_008065	FP236502.1	coding	downstream	95426	40447368 ~ 40447484 (-)
XLOC_008064	pcdh19	coding	downstream	152142	40300961 ~ 40390768 (-)
XLOC_008063	NA	coding	downstream	659822	39881585 ~ 39883088 (-)
XLOC_008062	BX511013.1	coding	downstream	826546	39712697 ~ 39716364 (-)
XLOC_008061	glra4a	coding	downstream	1468371	39002116 ~ 39074539 (-)
XLOC_008067	NA	coding	upstream	183004	40726030 ~ 40728200 (-)
XLOC_008068	elf1	coding	upstream	202807	40745833 ~ 40850481 (-)
XLOC_008069	BX510995.1	coding	upstream	284900	40827926 ~ 40828042 (-)
XLOC_008070	drp2	coding	upstream	376710	40919736 ~ 41243180 (-)
XLOC_008071	CR388141.1	coding	upstream	523972	41066998 ~ 41067114 (-)
XLOC_007641	CU855896.1	misc	downstream	38135070	2407736 ~ 2407840 (-)
XLOC_007640	CU855896.2	misc	downstream	38135479	2407328 ~ 2407431 (-)
XLOC_007639	CU855896.3	misc	downstream	38135838	2406945 ~ 2407072 (-)
XLOC_008055	BX088707.1	non-coding	downstream	1695535	38845504 ~ 38847375 (-)
XLOC_008054	NA	non-coding	downstream	1712468	38828803 ~ 38830442 (-)
XLOC_008050	NA	non-coding	downstream	2434709	38107500 ~ 38108201 (-)
XLOC_008076	NA	non-coding	upstream	888487	41431513 ~ 41440841 (-)
XLOC_008080	BX247870.1	non-coding	upstream	1024377	41567403 ~ 41570590 (-)

Expression

Co-expression Network