CI01000019_01503557_01515831


Basic Information

Item Value
gene id CI01000019_01503557_01515831
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000019
NCBI id null
chromosome length 5832599
location 1503466 ~ 1517469 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000019_01503557_01515831.mRNA
ACATGGCCTTCAAGTAAAAAAAACAAAAAAAAAAAACGAAACCATGTCTTGGAAAAAGAAACTAGAGAAGAAACTTTAACTGGAATATGAAATATTGAAAACTCATTAATGTGACAGTCTCCTAGATAGCCTAATTGAAAAAATAATTATATTATTTGTGTCTTGCTTGTTTATTTATTATTAAATACTGTCATTTTTCTATACTGAGAAAAACTGACAGGGCAAATGCTTGATTAAAAGACTGCTGAATTTGATCCAAATCAATCAGCAATGGTTTTCAGTAGGCTGTGACCATTCATGTGCTATGATTTGTAGTCTTAACTCATTATAGTGGAAAAAAAAAAAAAAAAAAGAGTTTTAATTAGGCTAATTGATCTAAAAACGTGGTACAGTTTTGCTACTGTGGGTCTCCAAGGGTTAAAGGAGAGTAGCCTACAACAGGTATGCCTGATACAGTATACAGTATTTTTAAACATAAGTTTTTTTTTCTGTTTTCAAATAAAGTTATACATTTGAATAATGGCAATCCAATTAATCGACTTTCTGATGTAAGCTACTATAGGGTTCTTGAGCTGGTTATTCAGAAATTGGAAGTTTATATTGTTGCATTACAATATTTATTAGAATTAAGCTAAGCAAATAGTTTCCCCAAAAACGTCAGTTGTGTCATTATATACTCTCCCACATATTCTTTTAAACCTGCATGCTAATATTGTTTATGTTGAACACAAAATTACAATTTTGAAGAGACCTTTTTAATAGAACATCAGTTCATAGTGACCATGTCTGTCAAGCTCTAAAAACAACCATACATGTAGCACATACACTCTCTGGCCACTTTATTAGTAATAGCCTGTGCTATAGCAGCAGAAGATCACAGTGGGTGTCAGCTAATAACAGGAAACTGATGCTACAGAAAAAAGTTGTCATGTGTTCTATTCATGTTCAAGAGTTAAAATATCGTCAGAGCAGCCTTTTTTTGGATTTAGAGGTGTTATAAGAAATACGGATGTGGTGTGTGTGTGTGTGGCAATTTTTTTTTTTTATCTTTCACAGGAAGTTGAATGACGTCTCTTCACTGTCAGAAAAAAGGTACGGCACTGTCAATGGGGCAGTACCCTAAGGTACAAAAGTGAAAAGGTACATCTTTGTACCTTACTTACCCCTAAATGGTGCATATTAGTACCTTAAAAGTGCATATTTGTTCCTTAAAGGTACATATTAGTACTGTAAAAGTGCATATTTGTACCTTAAAGGTACATATTAGTACTGTGAAAGTGCATATTAGTACCTTAAAGGTACATATTAGTACTGTGAAATTGCATATTAGTACCTTAAAGGTACATATTAGTACTGTAAAAGTGCATATTTGTACCTTAAAGGTACATATTAGTACTGTAAAAGTACATATTAGTACCTTTTTACCATAGGGTACTGCCCCAGTGACAAGCACCGTACCTTTTTTCTGACAGTGTTTCTTCAGTTCACATTTAAAACAGGGTTAAATAATCCATGCAATTTTTTTTATTTTTTATTAATTATTTATTATTTAAACATACTGCAAAGAGATAATAAGACAGTTTTATTGTATCAGAAATGCAAAATAAGTAAGTGCAATAGTGATGACGGACACCAATAATGGAAATAAACATGGATGTGAAAAGCAATGTCATCTCCTGTTCCTGTGGACCCCCTAACATACCCTACACAGTTCCTGTTACTGAGACATATCCCATTAATGAGACAATTCGCATTCAGTGTGTAGAGGGCTACGTGAGGAAAGCAGGAACATCCAGCATGATCCGCTGCACAGAAAATGATGGCAACCCATACTGGCAATATGTCCTTAATTTCGAGTGCATACCTGATCCCAAAAAGCCACAAAAGCCCCTTACGACTCATTTCACATCCACCACCACAGAAAGAACAGAAATAAAGAGTTCCACAGTTCTTGGCACAAGCATGCCAACCACAGAAGTTAATGGATCTTCACATGATGACATCGAGAAAGAAGTGATAGAAACGGGATCCAACTATATCATAACGTCTGTACATCTGAACACTGTTCAGCTGACCCAAACAAAGCAGCCAACAATCCCACATCAGTCTCTGTCAATGACACAAATCAACCACAAACAGGCTCCACAAATGGTGTCGACACAAGTGACAAGCTCCTCCCACAAACAGACTCCTGTTAAAGACTTCGCCCTTAGCACTGCATAAAATACCATCTCAGCTGTACATATCTGATAAACCTCCATCTATTGTACTTTACCTCATTCTAATCCTTTAATGTTATCATAAAATGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000019_01503557_01515831.mRNA False 2314 mRNA 0.35 6 1503466 1517469

Neighbor

gene id symbol gene type direction distance location
CI01000019_01444034_01465802 NA coding downstream 37035 1443821 ~ 1466431 (-)
CI01000019_01397591_01406229 NA coding downstream 97044 1397467 ~ 1406422 (-)
CI01000019_01367542_01396290 LAMB1B coding downstream 107176 1367524 ~ 1396290 (-)
CI01000019_01253674_01268268 VETZ, VEZT coding downstream 235198 1252664 ~ 1268268 (-)
CI01000019_01238694_01247650 METAP2A, METAP2 coding downstream 255816 1238646 ~ 1247650 (-)
CI01000019_01580774_01598483 PRKCQ coding upstream 63179 1580648 ~ 1599007 (-)
CI01000019_01660708_01661966 NA coding upstream 142248 1659717 ~ 1661970 (-)
CI01000019_01676776_01677954 NA coding upstream 159194 1676663 ~ 1678572 (-)
CI01000019_01701100_01714662 ITIH5 coding upstream 181939 1699408 ~ 1715168 (-)
CI01000019_01734247_01739663 KIN coding upstream 216778 1734247 ~ 1739663 (-)
G107827 NA non-coding downstream 9965 1493127 ~ 1493501 (-)
G107819 NA non-coding downstream 26838 1476191 ~ 1476628 (-)
G107816 NA non-coding downstream 33382 1469796 ~ 1470084 (-)
G107811 NA non-coding downstream 44997 1458201 ~ 1458469 (-)
G107789 NA non-coding downstream 74488 1428776 ~ 1428978 (-)
G107830 NA non-coding upstream 12129 1529598 ~ 1530170 (-)
G107831 NA non-coding upstream 12745 1530214 ~ 1530453 (-)
G107863 NA non-coding upstream 32970 1550439 ~ 1550680 (-)
G107833 NA non-coding upstream 33809 1551278 ~ 1560567 (-)
G107839 NA non-coding upstream 60655 1578124 ~ 1580531 (-)
G107820 NA other downstream 24325 1478851 ~ 1479141 (-)
G107779 NA other downstream 79649 1423565 ~ 1423817 (-)
G109437 NA other upstream 822734 2340203 ~ 2340758 (-)
CI01000019_03618642_03619707 NDUFB2 other upstream 2100919 3618388 ~ 3619973 (-)
G110029 NA other upstream 2343532 3861001 ~ 4015766 (-)
CI01000019_05571685_05572535 LAMTOR4 other upstream 4053471 5570940 ~ 5572535 (-)

Expression


Co-expression Network