CI01000019_01660708_01661966


Basic Information

Item Value
gene id CI01000019_01660708_01661966
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000019
NCBI id null
chromosome length 5832599
location 1659717 ~ 1661970 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000019_01660708_01661966.mRNA
AGGCATGGATTGTGCAGAGGAGGAGGTGGATTTTAACTGGGAGGAGTACCTCGAAGAGACCGGAGCCACTGCCGCCCCTCACACTGCATTCAGACATGTGGAGCTCAGTCTTCAGAGCAGTTTTCAGCCTGGAATGAAGCTTGAAGTTGCTAATAAGGGCAGTCTGGATACATATTGGGTGGCCACCATCATAACCACATGTGGTCAGTTGCTATTGTTACGCTACTGTGGCTATGGCGACGACCGCAAGGCTGATTTCTGGTGTGATGTCATGACAGCTGAACTTCATCCTGTCGGCTGGTGTGCTCAGAACAACAAAACGCTTCAGCCTCCTGAAGCTTCTGTAACAACTGGAAAGTCTTTAGGTTTAAATGGATTATCTTCTCCCAACGGTTGAATTGATTCTTTGTAACTGGATTCATGTTATCAATGTTATCCTGTGGACTGTATCATTTCTTCATGAACTTTAACCCTGATATCAATGTTTGCCCAAACATAACAATGGTGAACAGTCACAATTCTTTATTGATCCTATTATGTGCATGTTTATATGCTTGCTACTATTGGTGAAGTTCCTACTGTAGTCTCGAAGTATAGTTGAACACTTTATTTTGTTATTTTGGTCAAAGTAAAATTGTTTGTTTGCTATAGACCAGGGGTGTCCAATCCTGTTCCTGGAGATCCAACCCTGATCAAACACACCTGTCTGTAATTATGAAGAGTTTCTTAAGATCTTAATTAGCTGGTTCAGTTGTGTTTGATCAGGGTTGGAGCTGAACTTTGCAGGAAGGTAGATCTCCAGGAACAGGATTGGGCACTCCTGCTATAGACAGTCCATGGCAGGATAGAGGCCCAAATACAGTTAAAGTTGGGTTAGGGTATGTAAAAAGTTCTATTCAAATGGAAACACATGAGAACACATGGACAAGTTATTCATTTGTTGAAGACGTTTTACTATCCTAAACAGATTCATTTGAGTAGAATATAACAGAATTAGGGCTCGTTCACACAGAATGCGTTTTTGATTTGAAAAACGCGAGACACGGGCAGTGGAATGGGGAAAAAACACAAGGTCTCAAGATGCGTTTTTTAAAAGTTGAACTGATTTTAACTTGAGCGCTGCATTTTTAGAACACCATGTCGTGTGCGAGACACTGCAAAATACAGAAGACGTGAATGGTTTTTCACGTCCGTCTAGCGTGTGTTTACATAGAAAAACAATGGAAAAGTAGAGCATTGGAATGGAAAAATGCGTTCTGTGCGAACGGCCCATTAGAATTAGAAGTTATATTCTTGTAAATGTCTGTCTGTGGAGTTAATATGCTGTGCGACTAGTAAAAATGGTCACGATTAGCAGTACAGGACTGGTATGGGTTTACTGAAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000019_01660708_01661966.mRNA True 1388 mRNA 0.41 3 1659717 1661970

Neighbor

gene id symbol gene type direction distance location
CI01000019_01580774_01598483 PRKCQ coding downstream 60710 1580648 ~ 1599007 (-)
CI01000019_01503557_01515831 NA coding downstream 142248 1503466 ~ 1517469 (-)
CI01000019_01444034_01465802 NA coding downstream 193286 1443821 ~ 1466431 (-)
CI01000019_01397591_01406229 NA coding downstream 253295 1397467 ~ 1406422 (-)
CI01000019_01367542_01396290 LAMB1B coding downstream 263427 1367524 ~ 1396290 (-)
CI01000019_01676776_01677954 NA coding upstream 14693 1676663 ~ 1678572 (-)
CI01000019_01701100_01714662 ITIH5 coding upstream 37438 1699408 ~ 1715168 (-)
CI01000019_01734247_01739663 KIN coding upstream 72277 1734247 ~ 1739663 (-)
CI01000019_02485969_02486810 NA coding upstream 823344 2485314 ~ 2486846 (-)
CI01000019_02502701_02503852 NA coding upstream 840253 2502223 ~ 2503874 (-)
G107885 NA non-coding downstream 36283 1623230 ~ 1623434 (-)
G107883 NA non-coding downstream 37396 1621985 ~ 1622321 (-)
G107882 NA non-coding downstream 37846 1621596 ~ 1621871 (-)
G107881 NA non-coding downstream 38147 1621276 ~ 1621570 (-)
G107875 NA non-coding downstream 50196 1609307 ~ 1609521 (-)
G107893 NA non-coding upstream 54211 1716181 ~ 1716541 (-)
G107836 NA non-coding upstream 59558 1721528 ~ 1730105 (-)
G107834 NA non-coding upstream 80816 1742786 ~ 1746146 (-)
G107929 NA non-coding upstream 160858 1822828 ~ 1823220 (-)
G107930 NA non-coding upstream 161374 1823344 ~ 1823614 (-)
G107820 NA other downstream 180576 1478851 ~ 1479141 (-)
G107779 NA other downstream 235900 1423565 ~ 1423817 (-)
G109437 NA other upstream 678233 2340203 ~ 2340758 (-)
CI01000019_03618642_03619707 NDUFB2 other upstream 1956418 3618388 ~ 3619973 (-)
G110029 NA other upstream 2199031 3861001 ~ 4015766 (-)
CI01000019_05571685_05572535 LAMTOR4 other upstream 3908970 5570940 ~ 5572535 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_027348 sfmbt2 coding NC_007115.7 CM002888.2 25300910 ~ 25359034 (+)