Gene
RNA
| Item | Value |
|---|---|
| gene id | G107885 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000019 |
| NCBI id | null |
| chromosome length | 5832599 |
| location | 1623230 ~ 1623434 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: BCL-6 corepressor-like protein 1 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU122665 | True | 205 | lncRNA | 0.31 | 1 | 1623230 | 1623434 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000019_01580774_01598483 | PRKCQ | coding | downstream | 24223 | 1580648 ~ 1599007 (-) |
| CI01000019_01503557_01515831 | NA | coding | downstream | 105761 | 1503466 ~ 1517469 (-) |
| CI01000019_01444034_01465802 | NA | coding | downstream | 156799 | 1443821 ~ 1466431 (-) |
| CI01000019_01397591_01406229 | NA | coding | downstream | 216808 | 1397467 ~ 1406422 (-) |
| CI01000019_01367542_01396290 | LAMB1B | coding | downstream | 226940 | 1367524 ~ 1396290 (-) |
| CI01000019_01660708_01661966 | NA | coding | upstream | 36283 | 1659717 ~ 1661970 (-) |
| CI01000019_01676776_01677954 | NA | coding | upstream | 53229 | 1676663 ~ 1678572 (-) |
| CI01000019_01701100_01714662 | ITIH5 | coding | upstream | 75974 | 1699408 ~ 1715168 (-) |
| CI01000019_01734247_01739663 | KIN | coding | upstream | 110813 | 1734247 ~ 1739663 (-) |
| CI01000019_02485969_02486810 | NA | coding | upstream | 861880 | 2485314 ~ 2486846 (-) |
| G107883 | NA | non-coding | downstream | 909 | 1621985 ~ 1622321 (-) |
| G107882 | NA | non-coding | downstream | 1359 | 1621596 ~ 1621871 (-) |
| G107881 | NA | non-coding | downstream | 1660 | 1621276 ~ 1621570 (-) |
| G107875 | NA | non-coding | downstream | 13709 | 1609307 ~ 1609521 (-) |
| G107839 | NA | non-coding | downstream | 42699 | 1578124 ~ 1580531 (-) |
| G107893 | NA | non-coding | upstream | 92747 | 1716181 ~ 1716541 (-) |
| G107836 | NA | non-coding | upstream | 98094 | 1721528 ~ 1730105 (-) |
| G107834 | NA | non-coding | upstream | 119352 | 1742786 ~ 1746146 (-) |
| G107929 | NA | non-coding | upstream | 199394 | 1822828 ~ 1823220 (-) |
| G107930 | NA | non-coding | upstream | 199910 | 1823344 ~ 1823614 (-) |
| G107820 | NA | other | downstream | 144089 | 1478851 ~ 1479141 (-) |
| G107779 | NA | other | downstream | 199413 | 1423565 ~ 1423817 (-) |
| G109437 | NA | other | upstream | 716769 | 2340203 ~ 2340758 (-) |
| CI01000019_03618642_03619707 | NDUFB2 | other | upstream | 1994954 | 3618388 ~ 3619973 (-) |
| G110029 | NA | other | upstream | 2237567 | 3861001 ~ 4015766 (-) |
| CI01000019_05571685_05572535 | LAMTOR4 | other | upstream | 3947506 | 5570940 ~ 5572535 (-) |
