CI01000021_00680850_00686621


Basic Information

Item Value
gene id CI01000021_00680850_00686621
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 680850 ~ 687286 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_00680850_00686621.mRNA
GCACCCAGCAACTGCTAAGTGGTACGACAGACGGGACTTTGTCTTCATTGAGTTTTTGGTGGAGGATAGCAAGGATGTGAAAGTAAATTTTGAAAAGTCCAAATTTGGTTTCAGCTGTCTCAGTGGGACGGATAATATGAAGCACTCAAATGAAATTGACCTTTTTGAATCCATCGATCAAGATCTCAACTGGCTTAGTGTTGACTTCAACAACTGGAAAGACTGGGAAAATGATTCAGATGAAGAATTGGCCAACTATGATCGCTTTTCAGAGATGATGAGCAACATGGGAGGAGAGGATGATTTACCTGATCTAGATGGAGCAGATGATGAATCAGCTGATAGTGATGATGAAATGGCTGCACTCCAGAAGATCGACATAACCCTCTGTTGGGAGTTAATATGCATATTGTTGTACAGAGCTTCGTTGTCCCCCTCCTTATGAGCAGTCCCGGCTTTTTTTTTGTTTTCTTTTAATCTCTACTAAAACATGATGTATACTTAAACTATTTGGAAAAACTGCACTGTGTTCATATTTTTTCAACTGATAAGCAATAGATGTGATGGAGAGTTTCTTTTTTTATTGTAAGGCATTGAAATTAAAATGAAAAGTGAAACAAACTTTGCAGAGGTGGAGGGAGTTTGTTTTGTAAAATCTGTATAGTTTACGACCTTGTGATTAAAGCGTAAGAACTGTAAAGTAGCAGTTATTAGACATAAGACCCACCTCCCTAAAATACTTCAATCATCTTCAACATTAGCCGTCAAGTCTCTTGAGGTGGTAACAGATTTGTAGGTGGCTGATATCTTCTGCTGACTCCCTCCAAAATTATCCAGTTTCCCATTCAAAGTCTATATTGGCACTGTATATGGTATTGGACTGTTAATGTCTTTAATATTATGACTGCAGTATGATGTCTTTACATGTAAAAAAAACTAGGTATTGTATGTTTCAGATCAAGTCTAAAACAAAAAGACCAAACAAGTTTGCACTATCAAAAAATTGGGTGTTAGACAGGACGCATTGCTGGTTGTGCGCATTGCTGGTTGAGTCCTATCAATGTTTTCAAAAGAAAAAAAAAAGCTTTCAATTTTGTCTACGTATTTCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_00680850_00686621.mRNA True 1110 mRNA 0.37 6 680850 687286

Neighbor

gene id symbol gene type direction distance location
CI01000021_00591222_00592439 NA coding upstream 87918 590317 ~ 592932 (+)
CI01000021_00558429_00561268 SNAI1B coding upstream 118763 557795 ~ 562087 (+)
CI01000021_00440399_00440684 NA coding upstream 239894 440399 ~ 440956 (+)
CI01000021_00349073_00352551 NA coding upstream 327729 347775 ~ 353121 (+)
CI01000021_00336727_00346126 NA coding upstream 334458 336420 ~ 346392 (+)
CI01000021_00699356_00722821 BAZ2A coding downstream 12070 699356 ~ 722977 (+)
CI01000021_00748689_00750893 AQP6, MIPB, MIPA, MIP coding downstream 60855 748141 ~ 751000 (+)
CI01000021_00822848_00831637 NA coding downstream 135562 822848 ~ 831680 (+)
CI01000021_00972210_01064592 SAMD10 coding downstream 283927 971213 ~ 1064715 (+)
CI01000021_01100408_01104630 NA coding downstream 413122 1100408 ~ 1104630 (+)
G115601 NA non-coding upstream 68464 611989 ~ 612386 (+)
G115581 NA non-coding upstream 107724 572728 ~ 573126 (+)
G115569 NA non-coding upstream 134268 546320 ~ 546582 (+)
G115566 NA non-coding upstream 137778 542840 ~ 543072 (+)
G115518 NA non-coding upstream 153191 523871 ~ 527659 (+)
G115653 NA non-coding downstream 69694 756980 ~ 757241 (+)
G115655 NA non-coding downstream 71266 758552 ~ 758762 (+)
G115660 NA non-coding downstream 82197 769483 ~ 786300 (+)
G115673 NA non-coding downstream 99456 786742 ~ 786958 (+)
G115674 NA non-coding downstream 99984 787270 ~ 788025 (+)
G115519 NA other upstream 196886 480530 ~ 483964 (+)
CI01000021_01332646_01333910 NA other downstream 645287 1331665 ~ 1333951 (+)
G116236 NA other downstream 1602531 2289817 ~ 2297195 (+)
G117237 NA other downstream 2550568 3237854 ~ 3243364 (+)
G117202 NA other downstream 2581858 3269144 ~ 3328233 (+)
G117484 NA other downstream 3268860 3956146 ~ 3957752 (+)

Expression


Co-expression Network