G117237


Basic Information

Item Value
gene id G117237
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 3237854 ~ 3243364 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU133219
CTTTTCAGCGCTGCGCTTGTTGTGTTCTGTCTTCCGGTTTATATTTCCACAACATATGAAGCTTGATTGGAAGCCCCATCAGCAGGACCGGTATCTGCTCCTTTGTGCAAGGAGGAACAGGATTAGCACTGCCGGAGCCCTACAAAATGACCTCCAGCAGGCCACTGGTGTGAATGTCTCTAACCAAACAATCAGAAACAGACTTCATGAGGGTGGCCTGAGGGCCAGACGTCGTCTAGTGGGCCCTGTGCTCACTGCCCGGCACTGTGGAGCTCGATTGGCATTTGCCATTGAACACCAGAATTGGCAGGTCCGCCACTGGCGCCCTGTGCTTTTCAGATGAGCACATGTGACAGACGTGAAAGGGTCTGGAGAAGCCGTGGAGAATGTTATGCTGCCTGTAACATGGTTCAGCATGACCGGATTGGTGGTGGGTCAGAGATGGTCTGGGGAGGCATATCCATGGAGGGACGCACAGACATCTACAGGCTAGACAATGGCACCCTGACTGCCATTAGGTATCAGGATGAAATCCTTGGACACACTGTCAGACCCTACACTGGTGCAGTGGGTCCTGGGTTCCTCCTGGTGCACAACAATGCCCGGCCTCATGTGGTGAGAGTATGCAGGCCATTGAATGGTCCCCACGCTCGCCTTTCGTTCCATCCGATGCCGCCAGGTTGCACCTCAGACTGTCCAGGAGCTCAGTGATGCCCTGGTCCAGATCTGGGGGGAAATACTCCAGGACACCATCCATTGCCTCATTGGGAGCATGCCCCGATGTTGTCAAGCATGCTTACAAGCATGTGGGGGCCATACAAACAACTCAGTACAATTTTGAGTTGCTGGAATGAAATTTCATCAAAATAGACTAGCCTGCTGCATCATTTTTTCACTTTGATTTTCGGGGTGTCTTTGAATTCTGTCCTCTGTAAGTTGATAATTTTCATTTCCATCAAACGATGTGGCATCCTTTCATTCCTAACACATTACCCAGTCCATATCAGTATAGATATCCAGCATGATATTTTTCCCCATTGAGATCTGATGTGTTTTCAAAGTGTTCCTTTAATTTTTTTGAACAGTGTATATAAAGAAGTCTGGGCTTGGGACAAGGGTAAAACAAAATCTATGCATCCAAGCCATTTGAAAACAGGAAAAAAAAAAATGGTAGACTTTGGCATATTTCATAAATGGTCTTTTTGTTTAAAAAACAAAAAACAAAAAAACAAAAGCTGACTTCTTTAATAAAAATCAACCCCTGGGACATTAAAATAGTAGTTGAAACACTCAATATTTACACTGATTTTTATGTGTTTTATGAAACGCTGAATCATATCCCTCTTCTCATTCTCTGCCCATTTCCCAACTCGCTCCCAAAACATTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133219 True 1388 TUCP 0.46 2 3237854 3243364

Neighbor

gene id symbol gene type direction distance location
CI01000021_03164405_03179692 FOXP1A coding upstream 57905 3164405 ~ 3179949 (+)
CI01000021_03119361_03125084 EIF4E3 coding upstream 111073 3119361 ~ 3126781 (+)
CI01000021_03101146_03115161 RYBPA coding upstream 122386 3100953 ~ 3115468 (+)
CI01000021_03044076_03086657 NA coding upstream 151197 3044076 ~ 3086657 (+)
CI01000021_02930718_02985342 CNTN3A.2 coding upstream 252512 2930718 ~ 2985342 (+)
CI01000021_03349081_03350266 NA coding downstream 105717 3349081 ~ 3351180 (+)
CI01000021_03382666_03386768 S1, KRT8, E3, KRT4 coding downstream 137405 3380769 ~ 3386900 (+)
CI01000021_03428718_03432817 NA coding downstream 185212 3428576 ~ 3433102 (+)
CI01000021_03510302_03551418 PLXNB1A coding downstream 266884 3510248 ~ 3551572 (+)
CI01000021_03562381_03570309 NA coding downstream 318923 3562287 ~ 3571272 (+)
G117182 NA non-coding upstream 213621 3024032 ~ 3024233 (+)
G117164 NA non-coding upstream 345325 2892107 ~ 2892529 (+)
G117161 NA non-coding upstream 347993 2889239 ~ 2889861 (+)
G117138 NA non-coding upstream 367527 2869955 ~ 2870327 (+)
G117137 NA non-coding upstream 369726 2867811 ~ 2868128 (+)
G117202 NA non-coding downstream 25780 3269144 ~ 3328233 (+)
G117260 NA non-coding downstream 49902 3293266 ~ 3293887 (+)
G117211 NA non-coding downstream 77233 3320597 ~ 3323372 (+)
G117303 NA non-coding downstream 124950 3368314 ~ 3368525 (+)
G117306 NA non-coding downstream 131682 3375046 ~ 3375311 (+)
G116236 NA other upstream 940659 2289817 ~ 2297195 (+)
CI01000021_01332646_01333910 NA other upstream 1903445 1331665 ~ 1333951 (+)
G115519 NA other upstream 2753890 480530 ~ 483964 (+)
G117484 NA other downstream 712782 3956146 ~ 3957752 (+)
G117493 NA other downstream 789636 4033000 ~ 4035676 (+)
CI01000021_04886787_04893309 PLAGL2 other downstream 1599369 4886337 ~ 4893474 (+)
G119701 NA other downstream 3556780 6800144 ~ 6860606 (+)

Expression


Co-expression Network