CI01000024_03060967_03068650 (MTX2)


Basic Information

Item Value
gene id CI01000024_03060967_03068650
gene name MTX2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 3060812 ~ 3069706 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000024_03060967_03068650.mRNA
ACTGCACATTCACAGATTCGGTTTTAGGGGAGTATATGGACGATGCAAAAACGTCTGCTTTCAAGATAAAACCCCAGTTATTGGATACATGCACGAATAAACCCCTATTTTCGTTTATTTGAATCAACTGCAATGGCAAAACAATGGTTAAGATTAATATAGCTGACTTTTATAGAGATTCTTCAAGTCTTTGTTTTTTTCATTGCCGTTCAAATATTTACCTAAAGGTTAAAATGTCGTGATTTTATCTAACATCCAATAATATCCTAAATAATTAGAACATTACCAAGTGTGTACTGTATTGAATTGTGTTTCTTTAGTTCTCCTTTTCTTTCTTTTAGAGGACGGGGTGAGATTCTCCGAGCTCTGCTCAAGCCTGGAACATTCTACAGCACCACAATAAAATACAAGTTCCGTTTAATGATGAGCTGAACATGACTTGAAAATATCTGTATATGTATAATGAGCCCTAATAAAATGGAAATGTACAAATGTGTCCTTGTATGTTTATTAATAAAAAATAATTATATAGTCTAACATATAATTCAGTAAGCCCTATCTCTGTTAATTGTTCATCTATTAATATTAATAACATTATTTATCGATTATTTTTATATATAAGTATTATGGAATAGCCTATTTACATTTTAAAACAATGAAGAAAGGTTTAATGCGTCTGTTAGCCTATAGGTTTTCACATATTAATATATGCTTATATTCTTGTTCACATAGCCTAGATGTAGGCTAAGAATGGATAATAATCTACATTGGTATAATAGTATTATTTCACGAAAGAATAATTGAGATGCAGCTCACACACACAGTGGAAAGCGCGCGCACTACTGGCCCGCGCACACGATTTATGGCCCGCGCCCAGTTCTAATGGCACCATAATGACCGCTTGCAGACACCTGCACCGCCTCTATAAAAATACATTAGCACATAAATAAATAGAAAATATCTAGAGCCTTAATAAAGAGTTTTTATTATGGTTACAACGAAATAAAAATAATAATAAACAATAGGCTAATAAAAAATATAAAGGTTTTAAGAATAATGTTGAAAAGCACAATTTGCAGTGAAATGCCGCTTTACGCGTTTGGAAGAGCACATAACAATGAACGACAAATAGCCTACTGGAAAAAAAAGAAAAGGAAGAAGATTAAAGTAGATTTCTTCTGCGCTGTCATGTCTCTTGCTGCAGAGGCTTTCGTCTCTCAGATTGCAGAGGATCAAATCCTGCTGTCAGATTCTGCATCCTCTCTGGCAGTTCAGACTTTCCTAAGGATGTGCGGCCTGCCAGTGCAGGTGTCCTGCCGTGCCAATGCTGAATACATGTCACCGTCAGGGAAGGTTCCTTTCATCCATGTTGGAAATCAAGTTGTGTCAGAATTGGGGCCGATTGTTCAATTCACAAAGGCAAAGGGTCATTCTCTGAGTGACGGGTTGGATGATGTCCAGAGGGCAGAGATGAAGGCTTACATGGAGTTGGTCAATAACATGCTGCTGACAGCTGAGTTGTATATCCAGTGGTGTGACGATTTTACTGCTACAGAGATCTCTAGGCCACGATACAGTAGTCCCTATTCTTGGCCCCTCAATCACATTCTGGCCTATCAGAAGCAGTGGGAGATACGGAGGAAGATGAACGCAATTGGATGGTCTGGAAAGAATCTGGAGCAGGTATATGAAGATGTGAGTCAGTGCTGTCAGGCCTTGTCGCAGCGATTAGGAACACAACCCTACTTTTTCAACAAACAGCCAACCGAACTAGACGCTCTGGTGTTTGGTCATCTTTTCACCATACTCACCACACAACTGACCAGCGACGAGCTTGCTGAAAAGGTTAAATCCTACACCAACCTGCTTTCTTTTTGCCATCGCATTGAACAGACTTACTTTAAGGAGCACGACCGAGAAGGCCAGTCGGTGTCCTCACGCCATTCCAAAAGCTCACTACCTTGAGCATCACCCTTTGCCCAATATTTCTCACTCCTTTGATCAGGCTGAAATGATTGACATCTTTAATATCCTTGGATTAAAAGACTTGAAATTGTTGTCCTGTTGAGGTTAAAACATCAAACAGATCAGTAGGAGGGAGAAAAGGGGCACTAAATAAA

Function

symbol description
mtx2 Predicted to be involved in mitochondrion organization. Predicted to act upstream of or within protein transport. Predicted to be located in membrane and mitochondrion. Predicted to be part of SAM complex. Predicted to be active in cytoplasm. Is expressed in blastoderm and female organism. Orthologous to human MTX2 (metaxin 2).

GO:

id name namespace
GO:0006626 protein targeting to mitochondrion biological_process

KEGG:

id description
K17776 MTX; metaxin

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000024_03060967_03068650.mRNA True 2120 mRNA 0.39 11 3060812 3069706

Neighbor

gene id symbol gene type direction distance location
CI01000024_03048421_03049271 NA coding downstream 11283 3048164 ~ 3049529 (-)
CI01000024_02939122_02964449 ABCC6A coding downstream 96363 2938383 ~ 2964449 (-)
CI01000024_02849288_02866286 NA coding downstream 194408 2849100 ~ 2866404 (-)
CI01000024_02829108_02838763 ATG9A coding downstream 221616 2828646 ~ 2839196 (-)
CI01000024_02771915_02777060 NA coding downstream 283752 2771806 ~ 2777060 (-)
CI01000024_03208565_03262749 KCNH7 coding upstream 138859 3208565 ~ 3262749 (-)
CI01000024_03284853_03286057 NA coding upstream 214504 3284210 ~ 3286057 (-)
CI01000024_03311028_03319956 NA coding upstream 241291 3310997 ~ 3319956 (-)
CI01000024_03449111_03472001 ATP7B coding upstream 379099 3448805 ~ 3472001 (-)
CI01000024_03473803_03480757 HTR2AB coding upstream 403884 3473590 ~ 3480757 (-)
G123385 NA non-coding downstream 5586 3054359 ~ 3055226 (-)
G123364 NA non-coding downstream 16252 3042806 ~ 3044560 (-)
G123467 NA non-coding downstream 21160 3039433 ~ 3039652 (-)
G123426 NA non-coding downstream 21586 3038975 ~ 3039226 (-)
G123485 NA non-coding upstream 18489 3088195 ~ 3088399 (-)
G123486 NA non-coding upstream 18770 3088476 ~ 3088691 (-)
G123512 NA non-coding upstream 61674 3131380 ~ 3132504 (-)
G123401 NA non-coding upstream 71871 3141577 ~ 3141904 (-)
G123390 NA non-coding upstream 72370 3142076 ~ 3143061 (-)
G123233 NA other downstream 505776 2547460 ~ 2555036 (-)
CI01000024_00825386_00837898 NA other downstream 2233961 824968 ~ 838550 (-)
CI01000024_03938368_03941795 NA other upstream 866336 3938315 ~ 3941924 (-)
G125457 NA other upstream 4287531 7357237 ~ 7358104 (-)
G125798 NA other upstream 4905961 7975667 ~ 7976047 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_031884 mtx2 coding NC_007117.7 CM002890.2 10871659 ~ 10879963 (+)