Gene
RNA
| Item | Value |
|---|---|
| gene id | G123120 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000024 |
| NCBI id | null |
| chromosome length | 8644187 |
| location | 2091484 ~ 2093216 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: cingulin-like protein 1 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU139790 | True | 343 | lncRNA | 0.52 | 3 | 2091484 | 2093216 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000024_01955762_01966845 | FAM117BA | coding | downstream | 124639 | 1953804 ~ 1966845 (-) |
| CI01000024_01922262_01923329 | CXCR4A | coding | downstream | 168155 | 1921891 ~ 1923329 (-) |
| CI01000024_01882305_01892725 | MCM6 | coding | downstream | 197568 | 1881911 ~ 1893916 (-) |
| CI01000024_01854695_01861662 | PNKD | coding | downstream | 229142 | 1854365 ~ 1862458 (-) |
| CI01000024_01847790_01854114 | CATIP | coding | downstream | 237370 | 1847780 ~ 1854114 (-) |
| CI01000024_02131229_02148749 | STK24, STK24B | coding | upstream | 37935 | 2131151 ~ 2148820 (-) |
| CI01000024_02170481_02175158 | NR4A2, NR4A2A, NR4A2B | coding | upstream | 76527 | 2169743 ~ 2175158 (-) |
| CI01000024_02249593_02250941 | NA | coding | upstream | 156377 | 2249593 ~ 2251094 (-) |
| CI01000024_02402657_02417463 | WDSUB1 | coding | upstream | 309197 | 2402413 ~ 2418061 (-) |
| CI01000024_02421600_02456292 | BAZ2B | coding | upstream | 328384 | 2421600 ~ 2456292 (-) |
| G123112 | NA | non-coding | downstream | 4845 | 2080654 ~ 2086639 (-) |
| G123113 | NA | non-coding | downstream | 7973 | 2083037 ~ 2083511 (-) |
| G123096 | NA | non-coding | downstream | 57882 | 2033359 ~ 2033602 (-) |
| G123077 | NA | non-coding | downstream | 65709 | 2025387 ~ 2025775 (-) |
| G123076 | NA | non-coding | downstream | 66754 | 2024396 ~ 2024730 (-) |
| G123152 | NA | non-coding | upstream | 118738 | 2211954 ~ 2212419 (-) |
| G123157 | NA | non-coding | upstream | 126849 | 2220065 ~ 2220355 (-) |
| G123158 | NA | non-coding | upstream | 127154 | 2220370 ~ 2220664 (-) |
| G123159 | NA | non-coding | upstream | 127552 | 2220768 ~ 2221073 (-) |
| G123163 | NA | non-coding | upstream | 168587 | 2261803 ~ 2262005 (-) |
| CI01000024_00825386_00837898 | NA | other | downstream | 1264633 | 824968 ~ 838550 (-) |
| G123233 | NA | other | upstream | 454244 | 2547460 ~ 2555036 (-) |
| CI01000024_03938368_03941795 | NA | other | upstream | 1842826 | 3938315 ~ 3941924 (-) |
| G125457 | NA | other | upstream | 5264021 | 7357237 ~ 7358104 (-) |
| G125798 | NA | other | upstream | 5882451 | 7975667 ~ 7976047 (-) |
