G126637


Basic Information

Item Value
gene id G126637
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 802318 ~ 802521 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU143866
CTTTAATACTTTTGTCTGCTTTTGTCCCCATAAATTATACCTGCCATCAAAGACATAAAGAAAAGATTTTATGAATCATCTGAAAGTAGTTAATGGTGTTGTCTAAAAGCATTCAGAAATGGCTCATAGAAATGTGAACTTGTTTGTGTAAACTGTGTAAATGTGTTTGAATGCACTAATCTCGTCTGGACTGACCCAATCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143866 True 204 lncRNA 0.34 1 802318 802521

Neighbor

gene id symbol gene type direction distance location
CI01000026_00776867_00777588 NEDD8, BRAFLDRAFT_284180, NEDD8L, NEDD8.S coding upstream 24488 776757 ~ 777830 (+)
CI01000026_00736709_00743165 LRP10 coding upstream 58530 736535 ~ 743788 (+)
CI01000026_00712126_00713370 MRPL52 coding upstream 88932 712085 ~ 713386 (+)
CI01000026_00678603_00703293 ACIN1B coding upstream 98684 677693 ~ 703634 (+)
CI01000026_00665765_00675919 EFS coding upstream 125068 664946 ~ 677250 (+)
CI01000026_00812986_00894233 SVEP1 coding downstream 10465 812986 ~ 894233 (+)
CI01000026_00917354_00920865 HAUS3 coding downstream 114833 917354 ~ 920921 (+)
CI01000026_00921518_00975614 POLN coding downstream 118997 921518 ~ 975786 (+)
CI01000026_01003422_01010038 NELFA, NELFA.L coding downstream 200901 1003422 ~ 1010599 (+)
CI01000026_01024484_01025519 NA coding downstream 221963 1024484 ~ 1025782 (+)
G126566 NA non-coding upstream 33235 768035 ~ 769083 (+)
G126565 NA non-coding upstream 36377 765700 ~ 765941 (+)
G126564 NA non-coding upstream 38247 763782 ~ 764071 (+)
G126562 NA non-coding upstream 39101 762573 ~ 763217 (+)
G126561 NA non-coding upstream 40736 760287 ~ 761582 (+)
G126591 NA non-coding downstream 103520 906041 ~ 912060 (+)
G126585 NA non-coding downstream 104799 907320 ~ 910451 (+)
G126620 NA non-coding downstream 132297 934818 ~ 935310 (+)
G126655 NA non-coding downstream 135394 937915 ~ 938141 (+)
G126656 NA non-coding downstream 135690 938211 ~ 938457 (+)
G126556 NA other upstream 47155 754791 ~ 755163 (+)
G127500 NA other downstream 1128662 1931183 ~ 1946439 (+)
G127531 NA other downstream 1506801 2309322 ~ 2312135 (+)
G127519 NA other downstream 1591162 2393683 ~ 2427006 (+)
CI01000026_02659356_02660297 NA other downstream 1856694 2658605 ~ 2660829 (+)
G127979 NA other downstream 2950030 3752551 ~ 3762986 (+)

Expression


Co-expression Network