G127500


Basic Information

Item Value
gene id G127500
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 1931183 ~ 1946439 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU144867
TGCGGCCAGCACAAACATGCTGACCTTCAAATAACCTCTGGCCCCTGCAGAAAGATCATCAGGGTCTGACAGCAACAGCCATTTCCTGAGAATAGCATGTCGGTGTTCATTATACACCAAGCCAACATCCAGCTTGAATTCTCCAATGACAGAGTCTTTCCGTAGTGACTTGGAGTCAAATACGGTTATAAATATAGATTCATCAAAAAGATCTGAAGGTTTCTCATAGAAGTTTAGAAAGAAAGTCTCATCAAAAAATGGATTATTGCCCTTCCTGATGCGTGTTCTCTTCGTCTGTCCTCCAACTGTAACCTTGACAACTGGTTTAATGTTGACACCAGGGAGCTGTCTTCCCTCAATGATGCGCAGCCGTACCTGGAGGTCCTGGGGTTTGTCAGAAAGGGGGGATTTGTTTCCGTGGCGTTTCTTTTTTTTAAGGCCATGGTTAAAGTTTGGTGGAGCCTTTTTGGGTGGTGCTGTAGGGGCCCCGATGTCTTGCCCCTGTGGCCCTGGAGTAGGTTCAGGCTCCTCCACCACCTCCATCATCAGCATGCTCTCAGTGTCCTCCTCACCCAAAGTGTCCAATGAGAAAACTGTAACTGTGTCCAGCTCCACTGGGGTGTGCTGGGCCTCTGGCTGTGGAGGAGGCTGGAAGATGGGTGCCATCCCTGGAGGAGGGATGTAGGAAACCTGCAGGGTTACTGTGGCCCCTGTGCTGTTCCTTTTGGTGTCTACCAGGGACACAGTGAAATTAGCAGCTAGGTTTGGAGAGTTGAGCACATCTCGAAGAGCTACTCGACACTCCCCCAGAAACCTATTTCTGCCCATTTTCTCATGGTCCTTGACAACAACATGAAGCTCTGCTGCAGAATCTAAAGGAACTCCCTTCAAGTCCCACTCAAAGCCCTCGTTCCAGACAGGATTGACATTATTTTTGATGACTTTGGTCTTCTTTTTTGTCCCTCTGAAAGTGATGCTAGCAAGTGGGTCACTATGCCTCTCCCCCTTTTCTACATTTCTCAAGTTGGTTGCCCTCTGTAGCAAACACCTCAACATGCTGCCTTGATGGCCAAACTCTCCAACAAGAAACAGGCCAAACTACCATCAGACTACAGAAGAGGGACAGATCCCGGCAGGCAGGACCCCCGCAAAAGTTGCTCTGAAGATAAATGCGTCTTGTGATCTTTAGGTCCAAAGCTGAAGTTGAGCGTGATATCCAGAATGGAATGTATCAGGAGTTGCATAAGCTCACCACTATCCTGAGAAAATCAATTTTTGTCCTTGATAAGGCGTCTGAATTGATAAACGAGTCTCGCAATCTTCCCTTACGAGCGCTTCTTACATGTGTACACAGAGACTGTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144867 True 1364 TUCP 0.48 11 1931183 1946439

Neighbor

gene id symbol gene type direction distance location
CI01000026_01604062_01608083 NA coding upstream 322016 1604003 ~ 1609167 (+)
CI01000026_01587300_01603806 CYP26B1 coding upstream 327377 1587300 ~ 1603806 (+)
CI01000026_01516754_01566669 EXOC6B coding upstream 362847 1516359 ~ 1568336 (+)
CI01000026_01479116_01511199 EXOC6B coding upstream 419865 1479116 ~ 1511318 (+)
CI01000026_01449646_01450471 NA coding upstream 480712 1448858 ~ 1450471 (+)
CI01000026_01961557_01976089 NA coding downstream 14531 1960970 ~ 1976089 (+)
CI01000026_02039441_02068942 NA coding downstream 90506 2036945 ~ 2070666 (+)
CI01000026_02080994_02090637 MTM1 coding downstream 134222 2080661 ~ 2090637 (+)
CI01000026_02097643_02120853 MTMR1A coding downstream 151015 2097454 ~ 2121455 (+)
CI01000026_02150810_02194735 ARRB2, ARRB2B coding downstream 203601 2150040 ~ 2196065 (+)
G127464 NA non-coding upstream 63010 1866583 ~ 1868173 (+)
G127459 NA non-coding upstream 68450 1862274 ~ 1862733 (+)
G127469 NA non-coding upstream 83178 1847743 ~ 1848005 (+)
G127467 NA non-coding upstream 86007 1844850 ~ 1845176 (+)
G127450 NA non-coding upstream 123873 1806880 ~ 1807310 (+)
G127515 NA non-coding downstream 36619 1983058 ~ 1983272 (+)
G127543 NA non-coding downstream 67854 2014293 ~ 2024089 (+)
G127548 NA non-coding downstream 127522 2073961 ~ 2074239 (+)
G127538 NA non-coding downstream 178759 2125198 ~ 2129093 (+)
G127555 NA non-coding downstream 192460 2138899 ~ 2139109 (+)
CI01000026_00776867_00777588 NEDD8, BRAFLDRAFT_284180, NEDD8L, NEDD8.S other upstream 1153386 776757 ~ 777830 (+)
G126556 NA other upstream 1176020 754791 ~ 755163 (+)
G127531 NA other downstream 362883 2309322 ~ 2312135 (+)
G127519 NA other downstream 447244 2393683 ~ 2427006 (+)
CI01000026_02659356_02660297 NA other downstream 712776 2658605 ~ 2660829 (+)
G127979 NA other downstream 1806112 3752551 ~ 3762986 (+)
CI01000026_04327206_04331151 DOK4, DOK5 other downstream 2341434 4327206 ~ 4332085 (+)

Expression


Co-expression Network