G127450


Basic Information

Item Value
gene id G127450
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 1806880 ~ 1807310 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU144808
GAGTCTGCTGCCTGAGCAAATCGTGCTACATTACTGCCGTTCTCGACAATGTACCTGTAGATTTAGCACTTGAACAAACAGCCTGGCACAAAAGGTGCATAGAGATCAATTTAAGATTCAAACTCTTGATACAAAACATACCCTTTGTGAGCTCTTGTTTTTAATGTTGATAATGTTATACGAGCAAGAATGCAAATCCAAATATCCACACGATTGCAAATGTGATATTGATATTATACAACATTTCAACAAATAAAAGGGTAATATTAAGTGATGTTCTTCACAATATTGTCAGTATTTGCTCTATTTTGCAACGAAAGCCACAGCACAACTACAACACAGAGCGGTGTTCCGTGAACGAATCTGCGGCTTTGAACGAATTGTTCGTGATTCAATGATTCATTCATAAATACAGCCGTTGAACGAACGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144808 True 431 lncRNA 0.38 1 1806880 1807310

Neighbor

gene id symbol gene type direction distance location
CI01000026_01604062_01608083 NA coding upstream 197713 1604003 ~ 1609167 (+)
CI01000026_01587300_01603806 CYP26B1 coding upstream 203074 1587300 ~ 1603806 (+)
CI01000026_01516754_01566669 EXOC6B coding upstream 238544 1516359 ~ 1568336 (+)
CI01000026_01479116_01511199 EXOC6B coding upstream 295562 1479116 ~ 1511318 (+)
CI01000026_01449646_01450471 NA coding upstream 356409 1448858 ~ 1450471 (+)
CI01000026_01961557_01976089 NA coding downstream 153660 1960970 ~ 1976089 (+)
CI01000026_02039441_02068942 NA coding downstream 229635 2036945 ~ 2070666 (+)
CI01000026_02080994_02090637 MTM1 coding downstream 273351 2080661 ~ 2090637 (+)
CI01000026_02097643_02120853 MTMR1A coding downstream 290144 2097454 ~ 2121455 (+)
CI01000026_02150810_02194735 ARRB2, ARRB2B coding downstream 342730 2150040 ~ 2196065 (+)
G127445 NA non-coding upstream 29679 1776968 ~ 1777201 (+)
G127444 NA non-coding upstream 31523 1775080 ~ 1775357 (+)
G127436 NA non-coding upstream 46109 1760465 ~ 1760771 (+)
G127417 NA non-coding upstream 70753 1735867 ~ 1736127 (+)
G127405 NA non-coding upstream 90601 1715662 ~ 1716279 (+)
G127467 NA non-coding downstream 37540 1844850 ~ 1845176 (+)
G127469 NA non-coding downstream 40433 1847743 ~ 1848005 (+)
G127459 NA non-coding downstream 54964 1862274 ~ 1862733 (+)
G127464 NA non-coding downstream 59273 1866583 ~ 1868173 (+)
G127515 NA non-coding downstream 175748 1983058 ~ 1983272 (+)
CI01000026_00776867_00777588 NEDD8, BRAFLDRAFT_284180, NEDD8L, NEDD8.S other upstream 1029083 776757 ~ 777830 (+)
G126556 NA other upstream 1051717 754791 ~ 755163 (+)
G127500 NA other downstream 123873 1931183 ~ 1946439 (+)
G127531 NA other downstream 502012 2309322 ~ 2312135 (+)
G127519 NA other downstream 586373 2393683 ~ 2427006 (+)
CI01000026_02659356_02660297 NA other downstream 851905 2658605 ~ 2660829 (+)
G127979 NA other downstream 1945241 3752551 ~ 3762986 (+)

Expression


Co-expression Network