Gene
RNA
| Item | Value |
|---|---|
| gene id | G127405 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000026 |
| NCBI id | null |
| chromosome length | 17172400 |
| location | 1715662 ~ 1716279 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU144754 | False | 618 | lncRNA | 0.37 | 1 | 1715662 | 1716279 |
| TU144752 | False | 424 | lncRNA | 0.36 | 1 | 1715788 | 1716211 |
| TU144755 | True | 492 | lncRNA | 0.35 | 1 | 1715788 | 1716279 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000026_01604062_01608083 | NA | coding | upstream | 106495 | 1604003 ~ 1609167 (+) |
| CI01000026_01587300_01603806 | CYP26B1 | coding | upstream | 111856 | 1587300 ~ 1603806 (+) |
| CI01000026_01516754_01566669 | EXOC6B | coding | upstream | 147326 | 1516359 ~ 1568336 (+) |
| CI01000026_01479116_01511199 | EXOC6B | coding | upstream | 204344 | 1479116 ~ 1511318 (+) |
| CI01000026_01449646_01450471 | NA | coding | upstream | 265191 | 1448858 ~ 1450471 (+) |
| CI01000026_01961557_01976089 | NA | coding | downstream | 244691 | 1960970 ~ 1976089 (+) |
| CI01000026_02039441_02068942 | NA | coding | downstream | 320666 | 2036945 ~ 2070666 (+) |
| CI01000026_02080994_02090637 | MTM1 | coding | downstream | 364382 | 2080661 ~ 2090637 (+) |
| CI01000026_02097643_02120853 | MTMR1A | coding | downstream | 381175 | 2097454 ~ 2121455 (+) |
| CI01000026_02150810_02194735 | ARRB2, ARRB2B | coding | downstream | 433761 | 2150040 ~ 2196065 (+) |
| G127402 | NA | non-coding | upstream | 2996 | 1712379 ~ 1712666 (+) |
| G126752 | NA | non-coding | upstream | 276513 | 1438914 ~ 1439149 (+) |
| G126746 | NA | non-coding | upstream | 325629 | 1389823 ~ 1390033 (+) |
| G126603 | NA | non-coding | upstream | 331139 | 1330982 ~ 1384523 (+) |
| CI01000026_01378924_01381978 | NA | non-coding | upstream | 333157 | 1378344 ~ 1382540 (+) |
| G127417 | NA | non-coding | downstream | 19588 | 1735867 ~ 1736127 (+) |
| G127436 | NA | non-coding | downstream | 44186 | 1760465 ~ 1760771 (+) |
| G127444 | NA | non-coding | downstream | 58801 | 1775080 ~ 1775357 (+) |
| G127445 | NA | non-coding | downstream | 60689 | 1776968 ~ 1777201 (+) |
| G127450 | NA | non-coding | downstream | 90601 | 1806880 ~ 1807310 (+) |
| CI01000026_00776867_00777588 | NEDD8, BRAFLDRAFT_284180, NEDD8L, NEDD8.S | other | upstream | 937865 | 776757 ~ 777830 (+) |
| G126556 | NA | other | upstream | 960499 | 754791 ~ 755163 (+) |
| G127500 | NA | other | downstream | 214904 | 1931183 ~ 1946439 (+) |
| G127531 | NA | other | downstream | 593043 | 2309322 ~ 2312135 (+) |
| G127519 | NA | other | downstream | 677404 | 2393683 ~ 2427006 (+) |
| CI01000026_02659356_02660297 | NA | other | downstream | 942936 | 2658605 ~ 2660829 (+) |
| G127979 | NA | other | downstream | 2036272 | 3752551 ~ 3762986 (+) |
