G127402


Basic Information

Item Value
gene id G127402
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 1712379 ~ 1712666 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU144747
AAGGCAAAGGGGGAGCTGTTGCTGTAATTTATAGTAATATTTACAGTATTAGTCAAAAGTCTTTCAAATATAATTCCTTTGAAGTGATGGTACTCTATGTAACATTATGTAAGTTGACATTTGTGCTGGCTACTGTATACAGGCCACCAGGGCACCATACAGACTTTATCAAAGAATTTGCTGATTTTCTATCAGAGTTAGTACTAGCTGCAGATAAAGTCCTTGTTGTTGGTGATTTTAATATCTATGTAGATAATAAAAAAGACTCATTGGGATTGGCATTTACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144747 True 288 lncRNA 0.34 1 1712379 1712666

Neighbor

gene id symbol gene type direction distance location
CI01000026_01604062_01608083 NA coding upstream 103212 1604003 ~ 1609167 (+)
CI01000026_01587300_01603806 CYP26B1 coding upstream 108573 1587300 ~ 1603806 (+)
CI01000026_01516754_01566669 EXOC6B coding upstream 144043 1516359 ~ 1568336 (+)
CI01000026_01479116_01511199 EXOC6B coding upstream 201061 1479116 ~ 1511318 (+)
CI01000026_01449646_01450471 NA coding upstream 261908 1448858 ~ 1450471 (+)
CI01000026_01961557_01976089 NA coding downstream 248304 1960970 ~ 1976089 (+)
CI01000026_02039441_02068942 NA coding downstream 324279 2036945 ~ 2070666 (+)
CI01000026_02080994_02090637 MTM1 coding downstream 367995 2080661 ~ 2090637 (+)
CI01000026_02097643_02120853 MTMR1A coding downstream 384788 2097454 ~ 2121455 (+)
CI01000026_02150810_02194735 ARRB2, ARRB2B coding downstream 437374 2150040 ~ 2196065 (+)
G126752 NA non-coding upstream 273230 1438914 ~ 1439149 (+)
G126746 NA non-coding upstream 322346 1389823 ~ 1390033 (+)
G126603 NA non-coding upstream 327856 1330982 ~ 1384523 (+)
CI01000026_01378924_01381978 NA non-coding upstream 329874 1378344 ~ 1382540 (+)
CI01000026_01300881_01338917 MARK2B, MARK2 non-coding upstream 385189 1300881 ~ 1339688 (+)
G127405 NA non-coding downstream 2996 1715662 ~ 1716279 (+)
G127417 NA non-coding downstream 23201 1735867 ~ 1736127 (+)
G127436 NA non-coding downstream 47799 1760465 ~ 1760771 (+)
G127444 NA non-coding downstream 62414 1775080 ~ 1775357 (+)
G127445 NA non-coding downstream 64302 1776968 ~ 1777201 (+)
CI01000026_00776867_00777588 NEDD8, BRAFLDRAFT_284180, NEDD8L, NEDD8.S other upstream 934582 776757 ~ 777830 (+)
G126556 NA other upstream 957216 754791 ~ 755163 (+)
G127500 NA other downstream 218517 1931183 ~ 1946439 (+)
G127531 NA other downstream 596656 2309322 ~ 2312135 (+)
G127519 NA other downstream 681017 2393683 ~ 2427006 (+)
CI01000026_02659356_02660297 NA other downstream 946549 2658605 ~ 2660829 (+)
G127979 NA other downstream 2039885 3752551 ~ 3762986 (+)

Expression


Co-expression Network