G126603


Basic Information

Item Value
gene id G126603
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 1330982 ~ 1384523 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU143832
GTGTTCCGAAGATGAACGAAGGTCTTGCGGGTTTGGAGCGGCATGAGGGTAATTAATAACCAAAATTTCATTTTTGGGTAAACTAAGCCTTTAAAAATGGCTTCCATTTCCAACCATTTAAAGCAAGCAGGTTTTGTCTGTGTGCTTTTAAAACACACTAGACCTGGTAATACAGCTACATAAATAAATTTAAGATAGTTGTTTTCCATACATTTGCAGTCCAACAACATCCTTTATTGTCCATTCTCTGCAAAACACGTTTTAACTTTCAGTTCATCAGTCAGTTGTAAAGATCCGAGCTGCTATATCATCAAGCAGCCAGTCCACACCTGTAAGCAGGTTCTCGCCTGTCACGGCACTGCATCCCACTATGCACCAGTGATGGGTCTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143832 True 392 lncRNA 0.41 2 1330982 1384523

Neighbor

gene id symbol gene type direction distance location
CI01000026_01272100_01280856 NA coding upstream 49593 1272100 ~ 1281389 (+)
CI01000026_01216388_01217050 METTL12 coding upstream 113617 1216388 ~ 1217365 (+)
CI01000026_01162696_01203694 NA coding upstream 127058 1162423 ~ 1203924 (+)
CI01000026_01143460_01144643 NA coding upstream 186215 1143210 ~ 1144767 (+)
CI01000026_01090877_01106876 GBA2 coding upstream 222987 1090755 ~ 1107995 (+)
CI01000026_01394994_01396250 NA coding downstream 10471 1394994 ~ 1397862 (+)
CI01000026_01400733_01422031 PPP2R5B coding downstream 16210 1400733 ~ 1422283 (+)
CI01000026_01431872_01432826 GPHB5 coding downstream 45877 1430400 ~ 1432917 (+)
CI01000026_01449646_01450471 NA coding downstream 64335 1448858 ~ 1450471 (+)
CI01000026_01479116_01511199 EXOC6B coding downstream 94593 1479116 ~ 1511318 (+)
CI01000026_01300881_01338917 MARK2B, MARK2 non-coding upstream 3792 1300881 ~ 1339688 (+)
G126733 NA non-coding upstream 68578 1262190 ~ 1262404 (+)
G126713 NA non-coding upstream 104571 1226199 ~ 1226411 (+)
G126606 NA non-coding upstream 107627 1217570 ~ 1223355 (+)
G126621 NA non-coding upstream 387407 942754 ~ 943575 (+)
G126746 NA non-coding downstream 5300 1389823 ~ 1390033 (+)
G126752 NA non-coding downstream 54391 1438914 ~ 1439149 (+)
G127402 NA non-coding downstream 327856 1712379 ~ 1712666 (+)
G127405 NA non-coding downstream 331139 1715662 ~ 1716279 (+)
G127417 NA non-coding downstream 351344 1735867 ~ 1736127 (+)
CI01000026_00776867_00777588 NEDD8, BRAFLDRAFT_284180, NEDD8L, NEDD8.S other upstream 553185 776757 ~ 777830 (+)
G126556 NA other upstream 575819 754791 ~ 755163 (+)
G127500 NA other downstream 546660 1931183 ~ 1946439 (+)
G127531 NA other downstream 924799 2309322 ~ 2312135 (+)
G127519 NA other downstream 1009160 2393683 ~ 2427006 (+)
CI01000026_02659356_02660297 NA other downstream 1274692 2658605 ~ 2660829 (+)
G127979 NA other downstream 2368028 3752551 ~ 3762986 (+)

Expression


Co-expression Network