G126733


Basic Information

Item Value
gene id G126733
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 1262190 ~ 1262404 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU143966
TGTCATTAATTACTCACCCTCATGTCGTTCTCCACCCGTAAGACCTTCGTTCATCTTCGGAACACAAATTAAGATATTTTTGATTAAATCCGATGGCTCAGTGAGGCCTGCATAGACAGCAATGATACTTCCTCTCTCAAGATCCATAAAGGTACTAAAAACATATTTAAATCAGTTCATGTGAGTACAGTGGTTCTACCTTAATATTATAAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143966 True 215 lncRNA 0.37 1 1262190 1262404

Neighbor

gene id symbol gene type direction distance location
CI01000026_01216388_01217050 METTL12 coding upstream 44825 1216388 ~ 1217365 (+)
CI01000026_01162696_01203694 NA coding upstream 58266 1162423 ~ 1203924 (+)
CI01000026_01143460_01144643 NA coding upstream 117423 1143210 ~ 1144767 (+)
CI01000026_01090877_01106876 GBA2 coding upstream 154195 1090755 ~ 1107995 (+)
CI01000026_01081297_01082783 NA coding upstream 179398 1081297 ~ 1082792 (+)
CI01000026_01272100_01280856 NA coding downstream 9696 1272100 ~ 1281389 (+)
CI01000026_01300881_01338917 MARK2B, MARK2 coding downstream 38477 1300881 ~ 1339688 (+)
CI01000026_01354575_01360934 NAA40 coding downstream 92006 1354410 ~ 1361847 (+)
CI01000026_01364309_01371253 B3GAT3 coding downstream 101905 1364309 ~ 1371368 (+)
CI01000026_01378924_01381978 NA coding downstream 115940 1378344 ~ 1382540 (+)
G126713 NA non-coding upstream 35779 1226199 ~ 1226411 (+)
G126606 NA non-coding upstream 38835 1217570 ~ 1223355 (+)
G126621 NA non-coding upstream 318615 942754 ~ 943575 (+)
G126656 NA non-coding upstream 323733 938211 ~ 938457 (+)
G126655 NA non-coding upstream 324049 937915 ~ 938141 (+)
G126603 NA non-coding downstream 68578 1330982 ~ 1384523 (+)
G126746 NA non-coding downstream 127419 1389823 ~ 1390033 (+)
G126752 NA non-coding downstream 176510 1438914 ~ 1439149 (+)
CI01000026_00776867_00777588 NEDD8, BRAFLDRAFT_284180, NEDD8L, NEDD8.S other upstream 484393 776757 ~ 777830 (+)
G126556 NA other upstream 507027 754791 ~ 755163 (+)
G127500 NA other downstream 668779 1931183 ~ 1946439 (+)
G127531 NA other downstream 1046918 2309322 ~ 2312135 (+)
G127519 NA other downstream 1131279 2393683 ~ 2427006 (+)
CI01000026_02659356_02660297 NA other downstream 1396811 2658605 ~ 2660829 (+)
G127979 NA other downstream 2490147 3752551 ~ 3762986 (+)

Expression


Co-expression Network