Gene
RNA
| Item | Value |
|---|---|
| gene id | G134578 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000026 |
| NCBI id | null |
| chromosome length | 17172400 |
| location | 12321231 ~ 12321504 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU153036 | True | 274 | lncRNA | 0.51 | 1 | 12321231 | 12321504 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000026_12309243_12313256 | INSIG1 | coding | downstream | 7806 | 12309197 ~ 12313425 (-) |
| CI01000026_12289057_12291515 | EN2, ENG2A | coding | downstream | 27813 | 12288936 ~ 12293418 (-) |
| CI01000026_12220025_12255410 | RBM33 | coding | downstream | 65821 | 12220025 ~ 12255410 (-) |
| CI01000026_12132260_12141706 | RNF32 | coding | downstream | 179525 | 12131941 ~ 12141706 (-) |
| CI01000026_12079761_12087407 | NOM1 | coding | downstream | 232807 | 12079407 ~ 12088424 (-) |
| CI01000026_12358411_12363689 | HTR5AB, HTR5A, HTR5AA | coding | upstream | 36208 | 12357712 ~ 12364199 (-) |
| CI01000026_12444311_12444646 | NA | coding | upstream | 122472 | 12443976 ~ 12444862 (-) |
| CI01000026_12445673_12447183 | NA | coding | upstream | 123800 | 12445304 ~ 12448701 (-) |
| CI01000026_12536781_12546106 | KIF9 | coding | upstream | 215277 | 12536781 ~ 12546529 (-) |
| CI01000026_12570957_12581387 | NA | coding | upstream | 249291 | 12570795 ~ 12581513 (-) |
| G134577 | NA | non-coding | downstream | 2415 | 12318574 ~ 12318816 (-) |
| G134536 | NA | non-coding | downstream | 170446 | 12150525 ~ 12150785 (-) |
| G134498 | NA | non-coding | downstream | 244503 | 12076243 ~ 12076728 (-) |
| G134491 | NA | non-coding | downstream | 320004 | 12000949 ~ 12001227 (-) |
| G134490 | NA | non-coding | downstream | 325056 | 11995897 ~ 11996175 (-) |
| G134579 | NA | non-coding | upstream | 261 | 12321765 ~ 12322255 (-) |
| G134580 | NA | non-coding | upstream | 3785 | 12325289 ~ 12352296 (-) |
| G134588 | NA | non-coding | upstream | 35545 | 12357049 ~ 12357393 (-) |
| G134589 | NA | non-coding | upstream | 38393 | 12359897 ~ 12360270 (-) |
| G134635 | NA | non-coding | upstream | 73971 | 12395475 ~ 12395789 (-) |
| G133802 | NA | other | downstream | 1014050 | 11301915 ~ 11307181 (-) |
| G133790 | NA | other | downstream | 1483626 | 10834015 ~ 10859589 (-) |
| CI01000026_10788054_10788652 | CD59 | other | downstream | 1531077 | 10787339 ~ 10789709 (-) |
| CI01000026_10347872_10351783 | CEBPA | other | downstream | 1972274 | 10347746 ~ 10351783 (-) |
| G132721 | NA | other | downstream | 2770587 | 9550030 ~ 9550644 (-) |
| G136110 | NA | other | upstream | 2233413 | 14554917 ~ 14555436 (-) |
| CI01000026_16756776_16760261 | RBPMS2A, RBPMS2B, RBPMS2 | other | upstream | 4435225 | 16756729 ~ 16761341 (-) |
| G137667 | NA | other | upstream | 4484860 | 16806364 ~ 16808372 (-) |
| G137914 | NA | other | upstream | 4661747 | 16983251 ~ 16984352 (-) |
| G137967 | NA | other | upstream | 4746844 | 17068348 ~ 17069433 (-) |
