G135289


Basic Information

Item Value
gene id G135289
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 13739467 ~ 13739684 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU153832
GCAGCCCGAGGTTCAGTGCCATGCTCAAGGGTACAGCAGTTAGCCACTATCCAAAATTTTTAATGACTTCTGCACTATTATGTAATTCTTTAGATTAATTTTGATTTTATAACTCATGCACCAAAACACTGCTTATATCTTTTCAATATTTCATCAGTGTTGCCTGAACCTACTTGAGGACATTGTACAACCACAACAACATTCTAATATTGATTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153832 True 218 lncRNA 0.35 1 13739467 13739684

Neighbor

gene id symbol gene type direction distance location
CI01000026_13705684_13706187 NA coding upstream 32905 13704984 ~ 13706562 (+)
CI01000026_13356327_13411385 ADAMTS18 coding upstream 327733 13356327 ~ 13411734 (+)
CI01000026_13318769_13335447 NA coding upstream 402942 13318083 ~ 13336525 (+)
CI01000026_13218786_13290069 PHKB coding upstream 449313 13218786 ~ 13290154 (+)
CI01000026_13019100_13028307 GPT2 coding upstream 710099 13018120 ~ 13029368 (+)
CI01000026_13837986_13903960 NA coding downstream 98055 13837739 ~ 13904262 (+)
CI01000026_14074647_14076746 NA coding downstream 334726 14074410 ~ 14077101 (+)
CI01000026_14178928_14180619 NA coding downstream 438566 14178250 ~ 14180732 (+)
CI01000026_14205243_14205597 NA coding downstream 462752 14202436 ~ 14206263 (+)
CI01000026_14282383_14282886 NA coding downstream 542461 14282145 ~ 14283069 (+)
G135282 NA non-coding upstream 10625 13728388 ~ 13728842 (+)
G135279 NA non-coding upstream 20209 13719054 ~ 13719258 (+)
G135269 NA non-coding upstream 49353 13689844 ~ 13690114 (+)
G135256 NA non-coding upstream 72255 13666967 ~ 13667212 (+)
G135248 NA non-coding upstream 80347 13658819 ~ 13659120 (+)
G135294 NA non-coding downstream 1392 13741076 ~ 13741294 (+)
G135295 NA non-coding downstream 1782 13741466 ~ 13741705 (+)
G135305 NA non-coding downstream 35704 13775388 ~ 13775821 (+)
G135390 NA non-coding downstream 177674 13917358 ~ 13917571 (+)
G135399 NA non-coding downstream 225553 13965237 ~ 13965475 (+)
G133542 NA other upstream 2262560 11476117 ~ 11477544 (+)
CI01000026_11241496_11246081 NA other upstream 2484394 11241496 ~ 11246204 (+)
CI01000026_11075931_11078249 MDK, MDKA other upstream 2660387 11075784 ~ 11079080 (+)
G133192 NA other upstream 3577506 10159819 ~ 10161961 (+)
G132667 NA other upstream 4170307 9568739 ~ 9569160 (+)

Expression


Co-expression Network