RNA id: TU153832



Basic Information


Item Value
RNA id TU153832
length 218
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G135289
representative True

Chromosome Information


Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 13739467 ~ 13739684 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GCAGCCCGAGGTTCAGTGCCATGCTCAAGGGTACAGCAGTTAGCCACTATCCAAAATTTTTAATGACTTCTGCACTATTATGTAATTCTTTAGATTAATTTTGATTTTATAACTCATGCACCAAAACACTGCTTATATCTTTTCAATATTTCATCAGTGTTGCCTGAACCTACTTGAGGACATTGTACAACCACAACAACATTCTAATATTGATTTTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU153825 lncRNA upstream 10625 13728388 ~ 13728842 (+) True G135282
TU153822 lncRNA upstream 20209 13719054 ~ 13719258 (+) True G135279
TU153812 lncRNA upstream 49353 13689844 ~ 13690114 (+) True G135269
TU153799 lncRNA upstream 72255 13666967 ~ 13667212 (+) True G135256
TU153791 lncRNA upstream 80347 13658819 ~ 13659120 (+) True G135248
TU153837 lncRNA downstream 1392 13741076 ~ 13741294 (+) True G135294
TU153838 lncRNA downstream 1782 13741466 ~ 13741705 (+) True G135295
TU153848 lncRNA downstream 35704 13775388 ~ 13775821 (+) True G135305
TU153946 lncRNA downstream 177674 13917358 ~ 13917571 (+) True G135390
TU153955 lncRNA downstream 225553 13965237 ~ 13965475 (+) True G135399
CI01000026_13705684_13706187.mRNA mRNA upstream 32905 13704984 ~ 13706562 (+) True CI01000026_13705684_13706187
CI01000026_13356327_13411385.mRNA mRNA upstream 327733 13356327 ~ 13411734 (+) True CI01000026_13356327_13411385
CI01000026_13318769_13335447.mRNA mRNA upstream 402942 13318083 ~ 13336525 (+) True CI01000026_13318769_13335447
CI01000026_13218786_13290069.mRNA mRNA upstream 449313 13218786 ~ 13290154 (+) True CI01000026_13218786_13290069
CI01000026_13019100_13028307.mRNA mRNA upstream 710099 13018120 ~ 13029368 (+) True CI01000026_13019100_13028307
CI01000026_13837986_13903960.mRNA mRNA downstream 98055 13837739 ~ 13904262 (+) True CI01000026_13837986_13903960
CI01000026_14074647_14076746.mRNA mRNA downstream 334726 14074410 ~ 14077101 (+) True CI01000026_14074647_14076746
CI01000026_14178928_14180619.mRNA mRNA downstream 438566 14178250 ~ 14180732 (+) True CI01000026_14178928_14180619
CI01000026_14205243_14205597.mRNA mRNA downstream 462752 14202436 ~ 14206263 (+) True CI01000026_14205243_14205597
CI01000026_14282383_14282886.mRNA mRNA downstream 542461 14282145 ~ 14283069 (+) True CI01000026_14282383_14282886
TU151829 other upstream 2262560 11476117 ~ 11476907 (+) False G133542
TU151777 other upstream 2484394 11244933 ~ 11255073 (+) True G133497
TU151694 other upstream 2660387 11070768 ~ 11070876 (+) True G133429
TU151441 other upstream 3577506 10159819 ~ 10161961 (+) True G133192
TU150881 other upstream 4170307 9568739 ~ 9569160 (+) False G132667

Expression Profile