RNA id: TU153791



Basic Information


Item Value
RNA id TU153791
length 302
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G135248
representative True

Chromosome Information


Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 13658819 ~ 13659120 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GGGGGGTTAATAAATAAATGCCTTCTGAAGCAAAGCGATGCATTTGTGTAAAAAAAAAAAAAAAAAAGTCCATATTTAACAAGTTATGAAGTAAAATATCTAGCTTCCGCCAGACCGCCTTCCGTATTGAAGTTACGAAGAAAGTGTAAACTGGCGTCACGTCAGTTACACTTTTTCCGTCAGTTGAATAGCAAAGGCATAGGACGTAGCGTAAGCTTTGTGAACTGCAAGAGTTTTACACCTTCTGCGTACATTGAATACAGAAGGCGACTTCATAACTTGTTAAATATGGATATTTTTTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU153386 lncRNA upstream 241532 13415201 ~ 13417287 (+) True G134870
TU153396 lncRNA upstream 333416 13325202 ~ 13325403 (+) True G134880
TU153387 lncRNA upstream 354096 13304332 ~ 13304723 (+) True G134871
TU153287 lncRNA upstream 541827 13057320 ~ 13116992 (+) True G134772
TU153201 lncRNA upstream 624938 13032795 ~ 13033881 (+) False G134701
TU153799 lncRNA downstream 7847 13666967 ~ 13667212 (+) True G135256
TU153812 lncRNA downstream 30724 13689844 ~ 13690114 (+) True G135269
TU153822 lncRNA downstream 59934 13719054 ~ 13719258 (+) True G135279
TU153825 lncRNA downstream 69268 13728388 ~ 13728842 (+) True G135282
TU153832 lncRNA downstream 80347 13739467 ~ 13739684 (+) True G135289
CI01000026_13356327_13411385.mRNA mRNA upstream 247085 13356327 ~ 13411734 (+) True CI01000026_13356327_13411385
CI01000026_13318769_13335447.mRNA mRNA upstream 322294 13318083 ~ 13336525 (+) True CI01000026_13318769_13335447
CI01000026_13218786_13290069.mRNA mRNA upstream 368665 13218786 ~ 13290154 (+) True CI01000026_13218786_13290069
CI01000026_13019100_13028307.mRNA mRNA upstream 629451 13018120 ~ 13029368 (+) True CI01000026_13019100_13028307
CI01000026_12966022_12977066.mRNA mRNA upstream 681231 12965596 ~ 12977588 (+) True CI01000026_12966022_12977066
CI01000026_13705684_13706187.mRNA mRNA downstream 45864 13704984 ~ 13706562 (+) True CI01000026_13705684_13706187
CI01000026_13837986_13903960.mRNA mRNA downstream 178619 13837739 ~ 13904262 (+) True CI01000026_13837986_13903960
CI01000026_14074647_14076746.mRNA mRNA downstream 415290 14074410 ~ 14077101 (+) True CI01000026_14074647_14076746
CI01000026_14178928_14180619.mRNA mRNA downstream 519130 14178250 ~ 14180732 (+) True CI01000026_14178928_14180619
CI01000026_14205243_14205597.mRNA mRNA downstream 543316 14202436 ~ 14206263 (+) True CI01000026_14205243_14205597
TU151829 other upstream 2181912 11476117 ~ 11476907 (+) False G133542
TU151777 other upstream 2403746 11244933 ~ 11255073 (+) True G133497
TU151694 other upstream 2579739 11070768 ~ 11070876 (+) True G133429
TU151441 other upstream 3496858 10159819 ~ 10161961 (+) True G133192
TU150881 other upstream 4089659 9568739 ~ 9569160 (+) False G132667

Expression Profile