CI01000027_01843365_01850501 (FCGR2A)


Basic Information

Item Value
gene id CI01000027_01843365_01850501
gene name FCGR2A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1843365 ~ 1850501 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_01843365_01850501.mRNA
GAGGGATGTGGATGTCAGCAACTTGTGGTTATTGCCCTGTGCACCTTGCTGAAGGTGGAGTAGAGTTTCACTGGAGACAGAGACTGAGTGTAGAGGCTCAGAGAGAGAGATGGGAGCGTCCTACGCCGTGCCACTCGGATCTCCCTCTTCAACAAATGTGCATTCATGTGTCCACAGACGGCTGGAAGCGTTTGCTGAAGAACATCAGAACCAGGGCTGAGATGTGGGTACGCATAATTCTGACCTTCATTTACTCTACACTTCTTCTGTCAGGAGTCAGGGCCAGTAAATGGCTGGTGTATTTCTCCAGGACGGACATCTGCGTTTGGGCTGGGACCACAGTAACGCTGCCGTGCCGCTACGATTACCCCTCGCCCTACAGCTCCACGCGGTTCATGTGGTTCCACATCTCTGTGGAGGGCCGGCGGGAAATTGCCTACCATACTGACGGGAATCTGTTGAGCCTCTCGTACAGGGACAGGGTCAAATACATGGGGGGCCACAAAAGATGCAGTTTGCAGATCTCAAACGTGAAGCTGAGCGATGCAGGAATGTACCATTTCAGATTCGAGACCAACAACCAGCAGGAGCGATGGACGTCTCCTGATGCAATCACACTCTCCGTCACAGAGCTTCAGGTTCACGTACATCCACCGAGAATTGGCAACATGTTTGCTGCCGGCGAGACGGTCTTCCTGAGCTGTGTGGCACGAGGATGTGCCGCACCCGGCAGGAACTTTGCACTTTATCGGAATGGGATCAACTTGGGACAGTCCAGCAAGCTGTCAACCATCTATAACTTTGACAGCCAGCATGCAGGTACCTACACCTGCCGCCCAATACCCCCTCAAAATGTTCAATCACCGGGAGTCACCCTGGCTCTTGGATATGCTCCTCGCTACACCATGGTACAGATCACCCCTCGAGAGGCAGTCAGAGAGGGCGATTCGGTGACTTTGACCTGCAGTAGTGATGGAGCTCCGCCAGCAGAAAGTTTTGCCTGGTTTAAGGAAGGAGAGAGTGGCAGCTTGCCAGACAGCTTTAAACCTGAGCTGAGATTGTGGAGTTTGGACTACAGGGACCATGGAAAGTACTTCTGTGTGGCCCGCAACCCGCTCGGCACAGACCGGTCCAGGCTGCTTTTACTGAATGTTACCTACTCCCCAAAGAACACAAGAATCCTCATCAGTCCTAAAGGAGACATTATGGAAGGGTTTGCTGTCAATCTGACCTGCAGCAGCAACGCCAACCCTCCTGTGGAGAAATACTTCTGGTACAAACTGAACGGTGGGCAGCCCTGGACCAAAGGCACTGTGCAAAATCTCACCTTCCTTAGCGTGCGTTCCCATCATGCCGGACAGTACTACTGCACCGCATGGAATGTGTTAGGCATGGAGACATCAGCCACTATTTCTCTTTCAGTGCTTTCGGGCAGCTCGTTGACGCTGACCTGCAGCAGTCAGGCCAATCCGGCGGTGGAGAACTACACCTGGCACCGAATCAATGCGGCTGACGCCTGGGAAACTCGATCGGGTCCCAGCTACACCATTGCTGAGGTCAGCCCTCGAGCCAGCGGCCAGTACTACTGCGAGGCCCGCAACCGCATCGGAGCTCACAGCTCGCCGGTTCTGACGGTGAAAGTTCGAGGCCGACTGAAGGTGATCGCACTGGCGTCTGCAGTGGGCGTGTCTATCGGATTGATCTCATTGACCGTGGTCGTCATGATCAG

Function

symbol description
fcgr2a Predicted to enable transmembrane signaling receptor activity. Predicted to be involved in cell surface receptor signaling pathway and regulation of immune response. Located in Golgi apparatus and plasma membrane. Implicated in several diseases, including autoimmune disease (multiple); dengue disease (multiple); hematologic cancer (multiple); leukopenia (multiple); and malaria (multiple). Biomarker of asthma; atopic dermatitis; autoimmune disease (multiple); and chronic myeloid leukemia.

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_01843365_01850501.mRNA True 1729 mRNA 0.54 9 1843365 1850501

Neighbor

gene id symbol gene type direction distance location
CI01000027_01811625_01827803 RGL2 coding upstream 15183 1804199 ~ 1828182 (+)
CI01000027_01767031_01767683 NA coding upstream 75502 1766607 ~ 1767863 (+)
CI01000027_01572250_01574108 NA coding upstream 268955 1571893 ~ 1574410 (+)
CI01000027_01546280_01571152 NTRK1 coding upstream 272145 1545743 ~ 1571220 (+)
CI01000027_01543335_01543974 NA coding upstream 299136 1543335 ~ 1544229 (+)
CI01000027_01850735_01853042 NA coding downstream 234 1850735 ~ 1853513 (+)
CI01000027_01865502_01875022 HPN coding downstream 15001 1865502 ~ 1877374 (+)
CI01000027_01878501_01881301 NA coding downstream 28000 1878501 ~ 1882247 (+)
CI01000027_01926296_01931553 NA coding downstream 75457 1925958 ~ 1931686 (+)
CI01000027_01937897_01954661 NA coding downstream 87253 1937754 ~ 1954787 (+)
G138558 NA non-coding upstream 3217 1834015 ~ 1840148 (+)
G138594 NA non-coding upstream 49985 1789756 ~ 1793380 (+)
G138573 NA non-coding upstream 86577 1753206 ~ 1756788 (+)
G138541 NA non-coding upstream 93709 1740155 ~ 1749656 (+)
G138554 NA non-coding downstream 35733 1886234 ~ 1889683 (+)
G138549 NA non-coding downstream 40272 1890773 ~ 1903525 (+)
G138610 NA non-coding downstream 58741 1909242 ~ 1909468 (+)
G138612 NA non-coding downstream 60782 1911283 ~ 1911551 (+)
G138515 NA other upstream 166505 1664408 ~ 1676860 (+)
G138436 NA other upstream 335549 1506961 ~ 1507816 (+)
G138290 NA other upstream 844184 995970 ~ 999181 (+)
G138247 NA other upstream 973790 855388 ~ 893121 (+)
G138238 NA other upstream 1011682 829774 ~ 831683 (+)
G138915 NA other downstream 1633886 3484387 ~ 3486647 (+)
G138953 NA other downstream 1651571 3502072 ~ 3520065 (+)
G140436 NA other downstream 2886897 4737398 ~ 4774262 (+)
G140440 NA other downstream 2929916 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 3198422 5050310 ~ 5055755 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location