CI01000027_01926296_01931553


Basic Information

Item Value
gene id CI01000027_01926296_01931553
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1925958 ~ 1931686 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_01926296_01931553.mRNA
CTATAAATAGCACACACTGTAAACAAACAACAACAACAAAAGAATATTTGTGTTGCTTGCCGATTCTTTGCAATTATTTGTGAAATTTACTAACAATTTCTGAGTGAAAATTGTTTCTACACCATTTTTTTAGAGGATTGTAAACCACTGAGAAAGTGTAGGCTATGCTAATGCCATGGGCGTGTTGCTTGCAGTTACTGTGGACCAAAAAAGTAGGTCATTTGAGTTCCTCCTTACCACAACTTTTCACCATAAAAAGCCAAGGTACAGAGAAAAGACTCATTTCATCAGAAGAACATAGAGCTATATCTGAAGAAGAAAGGTGGAAGTGATCAGTCATGGCCCAGGCTCCGGTCTATTCTCAGGGCGGTTATGAAAATCCTCATGCAGTCCATCCTGACAACATCCAGCTCCATGCCCAGATCCTGAATCACCACAATGAGCCAGTGGTTGATGTTCAACCCCCTGTGTACCAGCGTCCTCGCGCTCCACCGGCTGACCCTGTGCCGGATTACATGGGTTACTCCATATTTACCACGGTGTTCTGCTGCATGTTTCTAGGACTGATCGCTGCTTACAACTCTGGAGCTACCCGCAAAGCTAACCGTGATGGACGGAGGGCAGAAGCAGCAAGCAGCTCCCAAACTGCACTCATCCTGAACCATGGTGATAATGCTGAAAATCCTCATGCAGTCCATCCTGACAGTGTCCAGCTGCAGGTTTTGAATCACCACGAAGAGCCTGTAGTCGTTGTTCAACCCCCTGCGTACCAGCGTACTCGCGCTCCACTGCCTGACCCTGTGCCGGATTACATGTGTTACTCACGATTTACCATACTGTTATGCTTCTGTATTGGAAGTGCTGCTCTTTATTACTCTAGAGCTACGCGCAAAGCTAATGGTGCTGGAGAGAGGGCAGAAGCAGCGGAAAACTCTCAAATTGCACTCATCCTGAACCATGTTGGTGTTGTTGTGGGCCTCATCTGTACTGGACTATATATATACATCAAAATATACCTTGAAAATAATTAACTAAAAGTTATCGTTCCAAAGCTATGCCCCCTTTTTTTTTTTTTTTTTTTTTTTGCAAATTTGGTATTGTACTCTCACATGCAATGTTTTCATAATGTTGGCTGAATATTTGTGAGTTTTTGATGATGGTTCA

Function

NR:

description
novel protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_01926296_01931553.mRNA True 1164 mRNA 0.44 4 1925958 1931686

Neighbor

gene id symbol gene type direction distance location
CI01000027_01878501_01881301 NA coding upstream 43711 1878501 ~ 1882247 (+)
CI01000027_01865502_01875022 HPN coding upstream 49019 1865502 ~ 1877374 (+)
CI01000027_01850735_01853042 NA coding upstream 72445 1850735 ~ 1853513 (+)
CI01000027_01843365_01850501 FCGR2A coding upstream 75457 1843365 ~ 1850501 (+)
CI01000027_01811625_01827803 RGL2 coding upstream 97776 1804199 ~ 1828182 (+)
CI01000027_01937897_01954661 NA coding downstream 6068 1937754 ~ 1954787 (+)
CI01000027_01976509_01978931 NA coding downstream 44762 1976448 ~ 1980721 (+)
CI01000027_01982332_01985064 NA coding downstream 50348 1982034 ~ 1985157 (+)
CI01000027_01998746_02018404 NA coding downstream 66986 1998672 ~ 2018789 (+)
CI01000027_02034579_02038173 NA coding downstream 102674 2034360 ~ 2039054 (+)
G138612 NA non-coding upstream 14407 1911283 ~ 1911551 (+)
G138610 NA non-coding upstream 16490 1909242 ~ 1909468 (+)
G138549 NA non-coding upstream 22433 1890773 ~ 1903525 (+)
G138554 NA non-coding upstream 36275 1886234 ~ 1889683 (+)
G138625 NA non-coding downstream 29866 1961552 ~ 1961856 (+)
G138627 NA non-coding downstream 33646 1965332 ~ 1965606 (+)
G138686 NA non-coding downstream 120894 2052580 ~ 2052935 (+)
G138672 NA non-coding downstream 145394 2077080 ~ 2082052 (+)
G138515 NA other upstream 249098 1664408 ~ 1676860 (+)
G138436 NA other upstream 418142 1506961 ~ 1507816 (+)
G138290 NA other upstream 926777 995970 ~ 999181 (+)
G138247 NA other upstream 1056383 855388 ~ 893121 (+)
G138238 NA other upstream 1094275 829774 ~ 831683 (+)
G138915 NA other downstream 1552701 3484387 ~ 3486647 (+)
G138953 NA other downstream 1570386 3502072 ~ 3520065 (+)
G140436 NA other downstream 2805712 4737398 ~ 4774262 (+)
G140440 NA other downstream 2848731 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 3117237 5050310 ~ 5055755 (+)

Expression


Co-expression Network