CI01000027_01998746_02018404


Basic Information

Item Value
gene id CI01000027_01998746_02018404
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1998672 ~ 2018789 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_01998746_02018404.mRNA
CAATAAAAGAACAAGCAGAACAGGAAAACCTCAAATCAGCCATATCCGACCACTGCAAGAGGGAAAATCACATCATGGACTGGGATAATGTCAGGGTCATCCGTGCTGAAAGTAACAAGTATCACCGCTGGAACAGGGAGGCCATTGAGATTAGGAAACGCGCACCAAGGACTATGAACCGGGATGAGGGAGCCTACACCTTATCCCACACCTGGGATGCAGTCCTGGAGAAGGCGTCAGACAGAGTGCAAGGGGAAAAAAACGCAAGAAACATGGATCCCAAAAATTCTCCAACAGAAGCAGGGCAGCCTTTACTTCCACTGCAGGAGGATCCTCCAGAGTACTCCAGTCATAAATTCCCTCCTTCTGAGATCTATCCCAGCACTTCAGGTCAACCTGCCCAGCAGTATAGAGCTCCGGCAGCACCTGGTCAGTGCATCCAAGTGCCATATCCAGGGCAGACTGTGGTCACTGTACAGCCTCCAGTTAATGTGTCCTTCACTCCACTGGCCAATCCACAGCCAGATTACCTGTGCTATTCCATCTTTACCATGCTGTGCTGCTGCTTACCTCTGGGATCGGCTGCTCTTGTTTACTCCATCACAGGTCATTGTGAAACCACAAGGTGGCTCCTGCAGTCACACAGTATGATGGGAACAGTGTCAAAGTTCTTGTCACTCCTCCCATTTGCTGCTGCCGTTCATCGCCAAGTTGACTATGGCCTACAGTTCCAAATGGAGCTGGATAATGGAAAGCTTCCCACATCCGATGCAGAGAACATTAAACACCACTGCAAAGAATACATGCTTGAATTTGTCAAGCAAATCAAACAACGTTTGACCGCTAATATGCAGCAGCTTCAGTCTCTTGTGTCACTGAGCCCATCTGTAGTGCTTAACAGCCAGAAAGGCCTCACTTAACTTCTATGTCATTTCTTTGTCTGTATACTGGAGATCTTGCAAAGCTTGATCAGCAGTGGAGAGTCCTGGACACATTGTCATGGGAATACACAGAGGACTGCCAAGCGGAGAAGTTCTGGATTGACACGAAAAACCACAGGGATGCACATTCTCAGAGATGAATTTGCTAAAAGCCAAACTACGCAGCAGAATGAAGGACACCCTTCTGGAGAACATCCTTCGCATTTGAGCCTTCATGCAAAGACATGAAATCTGCTGTCATCAGTTCGAACCGACAAAAGAGATGCTGGCCTTGTTCAATACAGACATGTATGACAAGGAGCAAGAAGGAGAAGAGTAGCATCAGAAAAGACTAATCCGTAAATAGTTCATTCAAATAATTCCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_01998746_02018404.mRNA True 1305 mRNA 0.47 4 1998672 2018789

Neighbor

gene id symbol gene type direction distance location
CI01000027_01982332_01985064 NA coding upstream 13515 1982034 ~ 1985157 (+)
CI01000027_01976509_01978931 NA coding upstream 17951 1976448 ~ 1980721 (+)
CI01000027_01937897_01954661 NA coding upstream 43885 1937754 ~ 1954787 (+)
CI01000027_01926296_01931553 NA coding upstream 66986 1925958 ~ 1931686 (+)
CI01000027_01878501_01881301 NA coding upstream 116425 1878501 ~ 1882247 (+)
CI01000027_02034579_02038173 NA coding downstream 15571 2034360 ~ 2039054 (+)
CI01000027_02040721_02047487 NA coding downstream 21832 2040621 ~ 2047566 (+)
CI01000027_02059709_02072254 GAPDHS, G3PT, GAPDH coding downstream 40588 2059377 ~ 2072405 (+)
CI01000027_02083444_02085743 NA coding downstream 64354 2083143 ~ 2085780 (+)
CI01000027_02106256_02118045 NA coding downstream 87396 2106185 ~ 2118498 (+)
G138627 NA non-coding upstream 33066 1965332 ~ 1965606 (+)
G138625 NA non-coding upstream 36816 1961552 ~ 1961856 (+)
G138612 NA non-coding upstream 87121 1911283 ~ 1911551 (+)
G138610 NA non-coding upstream 89204 1909242 ~ 1909468 (+)
G138686 NA non-coding downstream 33791 2052580 ~ 2052935 (+)
G138672 NA non-coding downstream 58291 2077080 ~ 2082052 (+)
G138693 NA non-coding downstream 100409 2119198 ~ 2119793 (+)
G138649 NA non-coding downstream 130540 2149329 ~ 2153741 (+)
G138656 NA non-coding downstream 135780 2154569 ~ 2155082 (+)
G138515 NA other upstream 321812 1664408 ~ 1676860 (+)
G138436 NA other upstream 490856 1506961 ~ 1507816 (+)
G138290 NA other upstream 999491 995970 ~ 999181 (+)
G138247 NA other upstream 1129097 855388 ~ 893121 (+)
G138238 NA other upstream 1166989 829774 ~ 831683 (+)
G138915 NA other downstream 1465598 3484387 ~ 3486647 (+)
G138953 NA other downstream 1483283 3502072 ~ 3520065 (+)
G140436 NA other downstream 2718609 4737398 ~ 4774262 (+)
G140440 NA other downstream 2761628 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 3030134 5050310 ~ 5055755 (+)

Expression


Co-expression Network